Carassius gibelio (silver crucian carp): 127947387
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Entry
127947387 CDS
T08819
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127947387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127947387
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgib00537
]
127947387
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Contactins
127947387
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgib00537
]
Others
127947387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
V-set_CD47
Fn3-III_PB4
PAXX
Motif
Other DBs
NCBI-GeneID:
127947387
NCBI-ProteinID:
XP_052400437
LinkDB
All DBs
Position
A25:complement(18257447..18336341)
Genome browser
AA seq
1042 aa
AA seq
DB search
MIAVVVQARAMIHASCCVLLSVSLALTLSCCILSVCADFPAVFGDESSGFGPVFEEQPVD
TIYPEESPEDKIIVSCRTRANPPASYSWRLNNTEIIIGNDDHYSLMGGNLVISFPDKSKH
AGNYSCLASNEFGTLVSQKASVQFGYLDMFSTDEREAVYVKEGQGAVLLCDPPPHFPEDL
SFRWILNEFPEFIPLDKRRFVSQTTGNLYISTVRASDSGNYSCFVSSPSIAKSVFSKFIP
LVPIAERSLRKYPADIKVKSPDTYTLLGQNVTLECFALGNPIPQIRWKKVDGDLPVHRHN
ISMAGSLLHLYDIQYEDEGLYDCEADNSKDKDRHKVHLYVEGAPEWVEKISSSERDIGGD
YIMSCLASGKPKPHVHFLKNGRMYAKNHELHFTDLTFDDSGMYQCIAENRHGTIYANAEL
RVFAGAPSFEGNPVKPKLLGAKNGRVVIDCKPRAAPRPTISWSKGTELLHNSSRIFIRPD
GSLELLNITKSDEGRYTCFAENNRGRANSSGSLSVTDATKITLAPSNTDVSVGKSARMEC
ATSHDPTLDLTFIWSLNTHVIDFDRDREHYERKMDVNQDGQTGTSSSELLISNTQLKHAG
RYSCTAQTPVDNVTVSAELVVRGPPGPPGGVRVDEVMASSVRVTWSHGTDNLSPISKYNI
QYRDVREQQDWREASTSPVNVEGNAEMASVINLTPWTEYEFRVIATNTLGTGPPSDPSPK
ITTKEARPVVAPSDISGGGGTSRELTITWTPVQPQYYYGSNFGYIIAFKPQNDPEWMTVT
LTDPQAQKYIHKDSKIPPSTRFEVKMKAFNSQGEGPFSVSAFIYSAQDVPAEAPTIIEAR
TLSATEAVVSWVPVQLQTVEGYQVWYWRESVENEASAQRVLVSSRENHTRLDNMKPNSHY
LIEVRAYNGAGYGPASQRHKIYTKKAPPSRPPKIIGTKVNYSGTAINIAWEPVEPLANES
TVEGYKVLYRQEGQPSGMLYTTVKQSIDLPMKKGDYLVEVRAHSEGGDGAVAQVRIAGAA
ILASPCLGFFWLLLTVLLSLIL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgtggtggtccaggccagagccatgatccacgcgtcgtgctgtgtcctgctg
agcgtgtcgctcgcgctcacactgtcctgctgcatcctgtcagtgtgcgctgatttccca
gcagtctttggagacgagtcgtcaggatttgggcctgtgtttgaggagcagcccgttgac
accatttaccctgaagagtctcctgaggacaagatcatcgtgagctgcagaacgagagcg
aaccccccggcctcgtacagttggaggctgaacaacacagaaataattattggaaatgac
gatcactacagtctgatgggaggaaacctagtcatcagcttccccgacaagagcaagcat
gctgggaactactcgtgtctggccagtaatgaattcgggacacttgtcagtcagaaagcc
tctgttcagttcggatacttggacatgttttccacggatgagcgggaggcggtctatgtg
aaggaggggcagggggcggtgcttctctgtgatccgcccccacacttcccagaggatctg
tccttccgctggatactcaacgagtttccggagttcattcctctggacaagcgccgcttt
gtgtctcagaccaccgggaacctctacatctccaccgtacgagcgtcagacagtgggaac
tactcctgtttcgtctccagtccatccatcgccaagagcgtcttcagcaagttcatcccg
ctggtgcccattgctgagcgttctctgaggaaatatcccgctgatatcaaagtcaaatct
ccagacacgtacacgctgctggggcagaacgtcacactggagtgcttcgcactgggaaac
cccatccctcagatccgatggaagaaggtggatggcgatctgccggtccatcgtcacaac
atcagtatggcaggaagtctcctccacctctacgacatccagtacgaagacgagggtttg
tacgattgcgaagctgacaattccaaagacaaagacagacacaaagtgcatctgtatgtg
gaaggcgctcctgaatgggtggagaagatcagcagctcagagagagacattggaggtgat
tacatcatgtcctgtctggccagcgggaaacccaaaccccacgtgcacttcctgaagaac
ggacgaatgtatgccaagaaccatgagttgcatttcacagacctgacatttgatgattct
gggatgtatcagtgtattgctgagaaccgtcatggcacgatatatgccaacgccgagctc
agggtcttcgccggcgctccttcgtttgaggggaatcccgtgaaacccaaacttctgggg
gccaaaaacgggcgtgtggtgattgactgcaaacccagagcagcaccgcggccaaccata
tcctggagcaaaggaaccgaactcctccacaactctagcagaattttcatacggccagac
gggagtttagagcttctgaacatcactaaatcagatgaagggagatacacatgtttcgca
gaaaacaacagaggcagagcaaacagctccggatcgctttcagtcaccgatgccacgaag
atcactctggccccgtccaacactgacgtcagcgtgggcaagagcgccaggatggagtgt
gccacgtcacatgaccccaccctcgacctcaccttcatctggtccctcaacacacacgtt
atcgacttcgacagagacagagaacattacgagcgcaaaatggatgttaatcaggatggt
cagactgggacgtccagctcagagctgttgatcagtaacacccagctgaaacacgccgga
cgttacagctgtacagcgcagacaccggtggacaacgtcacggtctccgcagagctggtg
gtcagaggtcctccaggtcctcccggtggtgtgcgtgtggatgaggtgatggccagcagc
gtgagggtgacctggagtcatgggacagataacttgagtcccatctccaaatacaacatc
cagtacagagacgtgcgagagcagcaggactggagagaagcctccacctctccagtgaat
gtggagggaaatgcagaaatggcctccgtgatcaatctgacgccctggactgagtatgag
ttcagggtcatcgctaccaacacgctgggcactggaccaccaagtgacccctcgcccaaa
atcaccaccaaagaagccaggcctgttgtggctccgtcagacatcagtggaggaggagga
accagtcgtgagctcaccatcacatggacgccggtccagccgcagtactactatggcagt
aattttggctacatcatcgcattcaagcctcaaaatgaccctgagtggatgacggtgaca
ttgaccgatcctcaggcccaaaagtacatccacaaagactcaaaaatcccgccgtccacc
aggtttgaagtgaagatgaaggcctttaacagtcagggcgaagggccattcagcgtcagc
gcattcatctactccgctcaggatgttcctgcagaagctcccaccatcatcgaggcgagg
acgctgtcggccacagaagccgtcgtgtcctgggtgcctgtacagctgcagacggtagaa
ggataccaggtctggtactggagggagtcagtggagaatgaggcatctgcgcagcgtgtt
ttggtttccagccgagaaaaccacacgcgtctggacaacatgaagcccaactcacattat
ctgatcgaggtgcgggcatataatggtgccggctatggacctgccagtcagcgccacaaa
atctacaccaagaaagcacctcctagtcggcctccaaaaatcatcggcacaaaggtgaac
tacagcggcacggcgatcaacattgcctgggagccggtggagccgctggccaatgagtcg
acggtggagggatataaggtcctgtacaggcaggaggggcagcccagtggcatgctgtac
accacagtcaagcagtccattgatctgcccatgaagaagggtgattatctggtggaggtg
cgtgcacacagcgaaggaggagacggagccgtcgcacaagtgcgcatcgcaggtgcagcc
attctggcgtctccatgtcttggattcttctggcttctcctcactgttttgttgagtttg
attctctga
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