Carassius gibelio (silver crucian carp): 127947392
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Entry
127947392 CDS
T08819
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127947392
Enzymes [BR:
cgib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
127947392
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127947392
Prokaryotic type
127947392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
127947392
NCBI-ProteinID:
XP_052400448
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All DBs
Position
A25:complement(17668858..17687857)
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AA seq
633 aa
AA seq
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MEEAEASPLTVTGEKRSLPEEDPGHAAKRLRVEQEEEEQESRGGDEEEPLEQESQGGDEE
EEEQEEESFADMMKHGLSEPDVGILKFISEHKGFSGILKERYSDFVVHEINKEGKMVRLD
DLSVPADVEEDSQDCSCAETQTLTEEQKQQLDELQHFKNKEGSVAIEVQEDSKEKRTLLH
RAVKTLYPGLETKTEDREGKKFIVAYHAAGKSALAAPRKHSWPKNRGSFCHFVLYKENKD
TMDAINLLSKFLRVRPNMFSYMGTKDKRAVTVQEIAVLKISAERLSHLNKCLMNLKLGNF
SYKKQPLKLGELQGNHFTVVLRNISGSLEQVEQAMTSLKETGFINYYGMQRFGTTAVPTH
RVGRAILQNNWKEVVDLILKPRPGAEKGYLVKCREEWARSQDPEAALKRLPVKRCVEGQL
LRGLAKYGKNNIITAFGLIPRNNRLMYIHSYQSYVWNCMVSKRMEAFGLRAVEGDLVLRG
GSAHVLSAEEAEKHSVHDVVMPLPGFDVIYPTHSVGGGYRDMLSADDLDIDSMRHKVRDY
SLAGAYRRILIRPRDVSWELIQYDDPRVPLVHTDVEKLENAPAPVYLKEGKYRALKMEFS
LPSSTYATMAVREVLKMDTSIKNQTQLNTSWLN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccgaggccagtccgctcacagtgaccggagagaagcgctccctccccgaa
gaggatccgggtcacgccgccaagaggctccgagtggagcaggaggaagaggagcaggag
agccgaggaggagatgaggaagagccgctggagcaggagagccaaggaggagatgaggag
gaggaagagcaggaggaggagagcttcgctgacatgatgaagcacggcctcagtgagccg
gatgtgggcattctcaagttcatcagcgaacacaaaggcttctcgggcatcctgaaggag
aggtactcagactttgtggtccatgagatcaataaagaggggaagatggttcgtctggat
gatttgtccgttcctgctgatgttgaggaggactctcaggactgcagctgtgctgagact
cagactctgacagaagagcagaagcagcagctggacgaactgcagcacttcaagaacaaa
gagggaagcgtggccatcgaggtgcaggaggattcgaaggagaagcgcactcttctgcac
agagctgtgaagactctgtatcccggcctggagaccaagaccgaggaccgagaagggaag
aagttcatcgtggcgtatcacgctgctgggaagagtgcgctggcagcccctcgaaagcac
tcgtggccaaagaaccgcgggagcttctgtcatttcgttctctataaggagaacaaggac
accatggacgccattaaccttctgtccaagttcctcagggtcagacccaacatgttctcc
tacatgggcaccaaagacaagagggccgtcacggtgcaggagatcgcagtgctgaagatc
agcgctgagagattgtctcacctcaacaaatgcctcatgaacctgaagctgggaaacttc
agctataagaaacagccattaaaactgggagaactgcagggaaaccacttcacagtggtt
ctcaggaatatctccggctctctggagcaggtggagcaagccatgacttcactcaaagaa
actggcttcatcaactactacggcatgcagcgcttcggcaccacagccgtgcccacacac
agagtcggcagggctatactgcagaacaactggaaggaagtggtggatctcatcctgaaa
cctcgtcctggagcggagaagggatatctggtgaagtgcagagaggagtgggcgcgctct
caggacccagaggcggccctcaagagactgccggtcaaacgctgcgtggagggccagtta
ctgcgaggcctggccaagtacggcaaaaacaacatcatcacagcgttcggactgatccct
cgtaacaacaggctgatgtacatccacagctatcaaagctacgtatggaactgtatggtc
agcaaacgcatggaagcctttgggctcagagctgtggagggagatctggttctcagagga
ggctctgctcatgttctgtccgctgaagaggcagaaaaacactcagttcatgacgtggtg
atgccgctgccagggttcgatgtcatttatcccactcacagtgtgggtggaggctacaga
gacatgctgagcgctgatgacctggacatcgatagcatgaggcataaagttcgggattac
tctctggccggcgcatacaggaggatcctcattcgccccagagacgtcagctgggaactg
atccagtacgatgatccacgagtgcctctcgttcacacagatgtggagaaattagaaaac
gctccagctccggtttacctcaaagaagggaagtatcgggccctgaaaatggagttttct
ctgccatcctccacgtacgccacgatggccgtcagagaagtgctgaagatggacaccagc
atcaagaatcagactcagctcaacaccagctggctgaactga
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