Carassius gibelio (silver crucian carp): 127948339
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Entry
127948339 CDS
T08819
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127948339
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
Others
127948339
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
127948339
NCBI-ProteinID:
XP_052400721
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All DBs
Position
B1:complement(28787642..28936342)
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AA seq
1241 aa
AA seq
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MERGIRYCRVNAFCTLLLVLFAWVPVTKTVITCRSCHLLDKWSGRELLVRMDSGVDFGKV
VDKNGDGSTALFNLAGAETGQPDCGATDNCEHAHSVRKRNTDSLRSEKMPPNDKWKSMRS
NGSKVYNVKRPGSQGSVPGEPHRRVRRSTQGPGSPPSARSLPAFGISTGRAARRVPRSDL
RGNRDERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGS
VTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDE
GATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWS
KLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQ
VSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVS
EAGGVYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKGRDW
RLLQAPSADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGAEL
TSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWN
KYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVQW
DLHDQGDRCLMGVKRVYRKLKPIARCVMGKTYSVTMISEPCDCTESDFECDYGFERRADG
KCTPAFWFLPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEKYTARRQLCPSQAPRGL
HLVTSEGKLTASVASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYK
NVGIYRVSATAENSLGSETVLLFLHITCQLESIHLSAPFVAVKNKEVNLTVVLSPSQVGT
VTYIWWLGNNSEPVITLEGSVAFTFPREGISVVTVQVSAGNTILQDRKTIAVHEYFRSHL
LAFSSNLDDHNPDVAEWRLDVSRVIKTSMVQATGVDPEQLLVTVLPGLPTAAEFFLLPDK
QLTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQITVYAAHLSAAPLVDTSENHS
GSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHVYAAMQDEKEQEMIQSPVSPTDSTPSCSS
QRELLTSLEPLDTEPNTQTIECINPHPRVKFSSDLPTYIDV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaatcagatattgccgggttaatgctttctgcaccctgcttttggttttg
ttcgcttgggttccggtgaccaaaacagtgataacttgcaggtcgtgtcacctgctggat
aagtggagcggtcgggaattattggtgaggatggacagtggtgtcgattttggcaaagtt
gttgataaaaatggagacgggtcaacggcgctgtttaatttggctggtgctgaaactggt
caacccgactgcggcgcaaccgacaactgcgagcatgctcactctgtgcgtaaaaggaat
acggacagtctccgctcagagaaaatgccacccaatgataaatggaagtcgatgcgcagt
aatggcagtaaagtttataacgtcaaacgtccaggttcgcaaggttcagtccctggagag
ccccatcgccgagtgcgtagaagcacccaaggacccggctcgcccccaagtgcgcgctcg
ctcccggcttttggcattagcaccgggcgggctgcgcgcagagtcccccgatctgatctg
agagggaacagggatgagcggagaacggccacatcgcgacaggaggagctgaaacttacc
agctctacctttgcgctgacaggagattccgctcacaaccaagccatggtgcactggtcc
ggccaaaacagcagcgtgattctcatgctgaccaaactgtatgacttcaatctgggcagt
gtcacagagagctccttatggaggtcaacagattacggaaccacttacgagaaactcaat
gaaaaggtgggagtaaagaccatcctcagctatctgtacgtcagccctaacaacaagcgc
aagatcatgctgctgacagatccagaggtggagagcagtttgctcatcagctcagatgaa
ggtgccacctatcaaaaatatcgcctcaacttctacatcctcagcctgttgtttcaccct
gagcaggaagactggatccttgcctatgggcatgaccagaagctctacagctctgttgag
ttcggccgtcgatggcagctcgttcacgagcgggtggcgcccaatcgattctactggtct
aaactgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagaaacc
caggctctttatgtcacatgcaagcttcagaactgcacagatgccaacaagggcaaacct
tttcctggatacattgaccccaactccctggtggtccaagatgagtatgtgtttgttcag
gtgtcaaccggcggtcggccaatctactacgtgtcatccaggcgagatgtgtttacaccc
atgaagcttcccaaatacacccttccaaaggatctgcatgtgatcagtacagatgagaac
cgggtcgtggcggcagttcaagagtggaaccagaatgacacttacaacctgtacgtgtca
gaggccggaggcgtttactacacgctggctttggagaacgtcatgagcagtatgggacca
gagggaaatgtcatgatagatctatatgaggtggcaggaataaaaggcatgttcttggct
aataagaagctgaataatgaggtgaagacatacataacctataacaaaggccgtgactgg
aggctcctgcaggctccctcggctgatctcagaggaaaccgaatccattgtatgctgccg
tactgttccctgcatctccacctgcacgtatctgcaaacccatacacatctggaaacata
gccagcagagagtctgcccctggaatcatagtagcatcaggttcaatcggcgcagagtta
acgagcagcaacgttagcatgttcatcacatccgacgctggaaacacgtggcggcagata
tttgatgaagagtacagtgttctgtatctggatcaaggcggagctttagtggcaattaga
cacacccctcttcccatcaggcacctctggttgagctttgatgaggggagggtgtggaac
aaatacagcttcacttcatccccactgttcgtggacggtgtcttgggcgaaccgggcgag
gaaacgcttataatgacgatcttcggtcacgtcagtcaccgctcagaatggcagctggta
aagatagacttcaggtctatctttaacagaagatgcatcgagtctgactatgtgcagtgg
gatttacatgaccagggtgaccgctgcctcatgggagtcaaaagagtctaccgaaagcta
aagcccatagccaggtgtgttatgggtaaaacctactctgtcacgatgatatccgagcca
tgtgactgcactgagtcagactttgagtgtgattatggcttcgagagaagggctgatggg
aaatgtactccagcattctggttcctgccctcctccatgtctcggacctgtactacagaa
cacacattcctcaacagcactgggtacagaaaggtggtgtctaataactgcaccggagga
gtgatggagaagtacacagctcgtaggcagctgtgccctagccaggcccctcggggcctt
cacttagtgaccagcgaagggaagctaacggcttctgttgccagcaacgtcacctttctc
gtcttcctggaggagggtgatggatcgaaaaccagcatcacagtggatttcggcgatgga
aatgctttcacctactccaacgtgagctctatcgaggatggcattaaacacatctacaag
aatgtgggaatctaccgagtgtcagccacggcggagaacagtctgggctcggaaacagtg
ctcctcttcctacacattacatgtcagctggagtctattcacctctccgccccttttgtc
gctgtgaaaaataaagaagtcaatctgacggtggttctctcgccaagccaagtgggaacg
gtcacctacatctggtggcttgggaacaattcagagcccgtgatcacgctggaggggagt
gtggcattcacgttccctcgagagggaatcagcgttgtcactgtgcaggtgtctgctggg
aataccatcctgcaagacaggaaaaccatcgctgtccacgaatacttcagatctcatctt
cttgccttttcatctaatcttgatgatcacaaccctgatgtggctgaatggaggcttgat
gtgagtcgagtcattaaaacctctatggtgcaggcgacaggagtggatccagagcagctg
ttggtcactgtgttgcccggactgccaacagcggccgagttcttcctgttaccggacaaa
cagctgacagaggggaaaccagacaaaacagccacccatttagaccagctctcagaactg
gttctcagcgctctgaatcagaatctggttcagttcacactcagaccaggagtccagatc
acagtatacgctgcccatttatcagcagcgcctctagtggacacaagtgagaatcacagt
ggctcagctatgctcatgctcctctctgtggtggtggtgggtttagccgtgttcctcatc
tataaattcaaaaggaagatcccaggcctccacgtctatgcagcgatgcaggacgaaaaa
gagcaagaaatgatccagagtccagtttctcccactgacagcacacccagctgcagctct
cagagagaactgctcacatcactggagcctctggacacagagcccaacacccagaccatc
gaatgcatcaatcctcatccacgtgtcaaattctcatcagatcttcctacatacatcgac
gtttga
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