Carassius gibelio (silver crucian carp): 127948347
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Entry
127948347 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127948347
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127948347
04082 Neuroactive ligand signaling
127948347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127948347
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127948347
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127948347
NCBI-ProteinID:
XP_052400730
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All DBs
Position
B1:complement(7524140..7609987)
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AA seq
1446 aa
AA seq
DB search
MMGAVVFLMVLWALLGWSQAAEKPPSLSVAVILGQTPTVSESALRPARGIGAPLDVTVLS
VQVNQTDPGSMLTHLCELMSRQRLHGLVYGDGTDQEAVAQMLDFVSSQTSMPILGIHGGS
AMTMAEKDASSSFFQFGASLQQEALLMLSIMEEYDWHVFSVVTTKFPGFQEFIATVRVTV
DHSFIRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEATLVMEEARSLGLTG
AGFVWIVPGLTTGNLEQIPETFPTGMISVVYDEWDYPLETRVHDAVGIISSAAAAMFREE
GRIPDGTASCHGQSEKPEVPPSALRRYMMGVSLGGRDHSFMDDGYQVNPKLVVIVLNTQR
EWEKMGRWENHTLKLKFPVWPRYNSFGDMDADENHLSIVTLEERPFVIVDDVDILTGTCM
RNSVPCRKHIKDNTTEGSYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNV
WNGMVGEVVYKKAIMAVGSLTINEERSEAIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYIFATTGYGIALQKGSYWKRLVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFVWEHLFYWRLRYCFTGL
CSGQPGILFTISRGIWSCIHGVHIEMKKSPELGFSPQANMLHLLKSAKEITTLGVTSPKQ
PMGSTLRPTTGLLEILDGAKGNNLAQKNAPYSNTSTMLSNRHKEPLNNTLLLGQRALSLT
DAQSGVAGNGGSGGGGETARPPASKPRALWKKSVDTLRQNPGPGGDSPPSTPQPTETLPM
KSQRYLPEDAPARSDMSDCSGRVDLQKQHKLKETLRKRNRLPRDLSDVELSTLRSQPSQQ
SNHSAQIYSQSSQGSQIYTIDSIDQEHSLHYPDIFSDHRDNKHRPSSSCEQQPILQLNSS
LLSQAHEPDVMQTAIMKDKKYNTYGKPGGAGTIAGGPGCIQDPRQTHCRSCLSKVSSYSG
LYTVRSPQYRCDACLHSANLYDISEDQFLHPDGRGTGGGSVDRAFSPFLSQPDASFTAYL
PQSDQEGDGLISHYQNEGVIIRQHSYENLPQKSSSRRVSLQDNMPYANVPSATLILDKPP
KNQSVHLNHTLGGVGISGLGIGRRSKSMYPTRPTENPFLQTLRDDQRLAHGRSSTDIYKQ
LVPLTLSQTDGNMLSVGMPTPDLYYSEHVMPYVAPPPLGTYTAPRAMSAGGARRVYKKMP
SIESDV
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagctgtagtcttcttgatggtcttatgggctttgttgggttggtcgcaggcc
gcagagaagcctccatccctgagtgtagctgtgatactgggccaaacccccactgtatcc
gaatcagccctgcgtccggctcgtgggataggtgcgcctctggatgtgactgttctcagc
gtccaggtgaaccagacggacccaggaagcatgcttacacacctgtgtgagctcatgtcc
cgacagagactgcatgggctggtctatggagatggcacggaccaggaagctgtggcacag
atgctggactttgtttcctctcagacttccatgcccatactgggaatccatggtggctct
gccatgacaatggccgaaaaggatgccagttcttcgtttttccagtttggggcctccctc
cagcaggaggcgctgttgatgctttctataatggaggaatacgactggcacgtcttctcg
gtggtcaccaccaaattcccaggtttccaggagttcatagccaccgtccgcgtcacggtg
gaccacagtttcattcgttgggatcttcagagtgtagtgacgctggacggcgtcggcgaa
cctgaggatcgagcccacgtgcagcttaaacgcatccagtcgcctgtcatcctcctctac
tgctccaaagatgaagcgacattggttatggaggaagcccgttcgctagggctcaccggg
gctggttttgtgtggattgttcctggtctgacgacaggaaatcttgaacaaatcccagaa
acctttccgacggggatgatatctgtggtgtacgacgaatgggattatcccctggagact
cgtgtgcacgacgctgtgggaattatcagttctgcagccgctgccatgttcagagaggaa
ggtcggatacctgatggaacggctagctgccacggccaatcagagaagccggaggtgccg
ccaagtgctctgcgaagatatatgatgggtgtcagtctaggaggtagagatcattcattc
atggacgatggctaccaagtcaatcccaagctggtcgtcattgttctgaacacacagaga
gaatgggagaagatgggacgatgggaaaaccacacattgaagttgaagtttccagtttgg
ccacgttataactcatttggggacatggacgctgatgagaaccacttgagcattgtgact
ctagaggaaagaccctttgttatagtggatgatgtggacattcttactggaacatgtatg
cgcaactctgtaccttgcaggaaacacattaaagataataccacggagggctcctatatc
aagcagtgctgcaagggcttttgtatagacatcttgaagaagattgccagaaatgtaaag
ttcacctatgatctttacctggtcacaaatggcaaacatggcaagaagatcaataatgtg
tggaacggcatggtgggggaggtagtctataaaaaggctataatggctgtgggttcattg
accataaatgaagagcggtcagaggccatagacttctctgtcccatttgttgagacaggc
atcagtgtgatggtgtcacgtagcaatggaacggtgtcgccctctgcgtttctagaaccc
ttcagtgcttcagtgtgggttatgatgttcgtcatgttactcatcgtcacagcaatcgct
gttttcctctttgaattcatcagtccgctcggttttaatagaaacctggcacagggcaaa
gaccctcatgggccctccttcactattggtaaggctgtctggctgctgtggggtctggtt
ttcaacaactctgtcccagtacagaaccccaggggcactaccagtaaatttattgtgtct
gtttgggcctttttcgctgtgatcttcctggccagctacactgccaacttggctgccttt
atgatccaagaggagtttgtggaccaagtaacaggtcttagtgacagaaagtttcagagt
ccctattcctattcaccaccttttcgcttcgggaccgtgccaaatgggagcacagagcga
aacatcaggaaaaactatccagacatgcaccagtacatggtgaaataccatcagactgga
gttcaggatgcactggtcagcctcaagacaggtaaactggatgctttcatatatgacgcg
gctgtgctcaactatatggcggggcgtgatgatggctgtaagctagtaactattggcagt
ggctacatctttgccacaacaggatatggcattgccctgcagaaaggatcctactggaaa
cggctggttgaccttgctatcctcgggatcattggagatggtgagatggaggagctggag
gcccagtggctgactggtatctgtcataatgagaagaatgaagtgatgagcagtcagctg
gatgtggataacatggctggtgtgttctatatgctcgcggctgccatggctctgtcgcta
attacttttgtctgggagcacctcttctactggaggctacgttactgtttcactggtctc
tgttctgggcagccaggaattctcttcactatcagcagggggatttggagttgtattcac
ggtgtccacattgagatgaagaaatccccagagttgggcttcagccctcaggccaacatg
ttacaccttctgaaatcggctaaagagatcacgacccttggagttacctcgcccaaacag
cccatgggtagcactctccgtcctactacgggcttgctggagattttggatggagcaaaa
ggcaacaacctcgcccagaaaaatgctccctatagcaataccagcaccatgctcagcaac
cgtcacaaagagccacttaacaatactctgttgctagggcaacgtgccctgagcttgacg
gatgctcagtcaggtgttgctggaaacggtggctcaggaggcggaggtgagaccgctcga
cctccagcctccaagccacgtgctctgtggaagaagtctgtggatactctgcggcagaac
ccaggtcctgggggtgattcccctccttctaccccacagcccaccgagaccctacctatg
aagagccagcgctacctgcctgaagatgcacccgcccgctcagatatgtcagattgctcg
ggtcgggtggacttgcaaaagcagcacaagttaaaagaaacgcttcggaaacggaaccgc
ctaccgcgggatctgagcgatgtggagctttcaactctgcgaagccagcccagccagcag
agtaaccacagcgctcagatctactctcagagcagccaggggagtcagatttacaccatt
gactccattgatcaggagcatagcctgcactacccagatatcttcagcgatcaccgcgat
aacaagcaccggccatcctcttcctgtgaacagcagccaatcctgcagctcaacagcagt
ctgctctcacaggctcacgaaccagatgtgatgcaaactgccatcatgaaggataaaaaa
tacaacacatatggaaagcctggtggtgcggggaccatcgccggcgggcctggttgtatt
caggatccacgacagacacactgtcgtagctgcctgtcgaaagtgtccagttactctggg
ctttacactgtacggtcccctcagtatcgctgcgatgcctgtctgcactctgcaaacctg
tacgacatcagcgaggatcagttcctccatccagatggacggggcactggcggcggaagt
gttgacagggccttctctccttttctctctcagcctgatgcttcctttacagcatatctt
ccccagagtgaccaagagggtgacggtcttattagtcactaccagaatgagggcgtaatc
atccgccagcactcgtatgagaacctgccccaaaagagttcctcacggcgggtcagtctg
caggacaacatgccatatgccaacgttccctcagcgacattaatcctagacaaacccccc
aaaaatcagtcggtccacctaaaccacacgctcgggggggttggcatcagcggactcggg
atcggtcgacgcagcaagtcaatgtatccgacacgcccaacggaaaaccctttcctccag
acgctccgtgacgaccagcgtctagctcacggccgcagctccacagacatttacaagcag
ctcgtgccactcacattaagccagactgatggcaatatgctcagcgtggggatgccgacc
cctgacctctattactccgagcatgtcatgccttatgtagcccctccccctctcggcaca
tacaccgctcccagggcaatgagcgctgggggagctcggcgcgtctacaagaagatgccg
agcatcgagtctgatgtctga
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integrated database retrieval system
