Carassius gibelio (silver crucian carp): 127948357
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Entry
127948357 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127948357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127948357
03021 Transcription machinery [BR:
cgib03021
]
127948357
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127948357
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127948357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127948357
NCBI-ProteinID:
XP_052400740
LinkDB
All DBs
Position
B1:1852191..1874249
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AA seq
608 aa
AA seq
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MYAALLDVVFVFRWSRCSPSDVFSASVCDLSIVAWLVDTADLSKGSMENGAHGAAQANGQ
EGHKPSGQAAVSGVQTQEPLQQVSMTPAQLLQTQTQILAAGQQSSTGASISAATPITLSQ
PIQIASTQGLNLPQFVLVQPGHSLSPQFQPQFIISPSPQGQTGLPQNPAQSSLALTAQAA
TPTRKIAALPAPASAPKRIDAVCVEEASDLEELELFAKNFKQRRIKLGFTQGDVGLAMGK
LYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAERMSADCVVSSASEMSPGLCES
LNRRRKKRTSIETNIRLALEKSFLEQSQKPSSEEITLISDQLNMEKEVVRVWFCNRRQKE
KRINPPSSSSSSGSALRTIYSSSSAAVSSGTSTLTVSPVVSLNSNSISNLTFSGGALGQV
MSNTPSIISMAPTVTTSTPVMTSPSLTPSTTAVKQEVAVSMATTAMQGAGQLLVTGTGLG
GANLTAFTGLNPTIISASQLMQGGALLSLSPALMNNNLLATIQALASGGALPLTSIDGNT
SLLFANNSVGNPAPSMVTTPFFLNPSSFSLLPANLLSAGGAGGGALNLQLTSDVTTMTKS
VGVASKAQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcacttctagatgtagtctttgtgtttcgctggtctcggtgttctccgtcg
gatgtgttctctgcgtccgtctgtgatctgagtatcgtagcgtggctcgtggacacagca
gatctgagcaaaggcagcatggagaacggagcgcatggagctgctcaggccaacggtcag
gagggccacaaacccagcggtcaagcagcggtcagcggcgttcagacacaggagccgctc
cagcaggtgagcatgactccagcgcagctgttgcagacgcagacgcagatcctggccgca
ggtcaacagagcagcactggagccagtatctctgcggccacgcccatcacactgtcccag
cccattcagatcgcctctacgcagggcttgaacctgccacagtttgtcttggtccagccg
ggtcactccctcagtcctcagtttcagcctcagttcatcatatctccgtctcctcagggt
cagaccggtctacctcagaacccagcgcagagcagcctcgccctcaccgcacaggctgct
acaccgacgaggaagatcgccgctctaccggctccagcatctgctcccaagcgcatcgat
gctgtgtgtgtggaggaggccagcgacctcgaggagctcgagctgttcgccaagaacttc
aaacagagacgcatcaagctgggcttcactcagggtgatgtggggctggcgatggggaaa
ctctacggaaacgacttcagtcagaccaccatctccagattcgaggccttgaacttgagc
ttcaagaacatgtgcaaactcaaacctctgctggagaaatggctgaacgatgcagagcgc
atgtctgcggactgcgtggtgtcgagtgcgagcgagatgtctccggggctctgcgagagt
ctaaaccgacgccgcaagaagcgcaccagcatcgagaccaacatccgtctggccttagag
aagagcttcctggagcagagtcagaagccgtcgtcagaggagatcacactgatctcagat
cagctgaacatggagaaggaggtggtgcgcgtctggttctgtaaccgcagacagaaggag
aagcggatcaatcctcccagcagcagcagctcgtccggatcagccctcagaaccatctac
agcagctcctcagccgcggtgtccagcggcacgagcacactgacggtcagtcctgtggtt
tctctgaacagcaacagtatctctaacctgacgttcagtggcggagccctgggtcaggtg
atgtcgaacacgccctccatcatctccatggcgcccaccgtcaccacgtccactccggtc
atgacatcaccctccctcaccccatccaccacagctgtcaaacaggaagtggcggtttcc
atggcgacaacagccatgcagggggcggggcagctgctggtgacaggcacaggactggga
ggagctaatctgacggccttcacgggtttaaacccgacgatcatatcggcgtcgcagctg
atgcaaggcggtgcgctgctgagtctgagtcctgcgctgatgaacaacaacctgctggcc
accatccaggctctggcgtctggcggcgctcttcctctgacctccatcgatggaaacacc
agcctgctattcgccaataacagcgtaggaaaccccgcccccagcatggtgaccacaccc
ttcttcctcaacccatccagcttctctctgctgccggccaatctgctgtcggcgggcggt
gctggaggcggagctctcaacctgcagctgaccagtgatgtcaccacgatgaccaagagt
gtgggtgtggcctcgaaggcgcagtga
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