Carassius gibelio (silver crucian carp): 127948375
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Entry
127948375 CDS
T08819
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
KO
K13111
WD40 repeat-containing protein SMU1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127948375
Spliceosome [BR:
cgib03041
]
Complex B
Other components
Complex B specific factors
127948375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
LisH_TPL
Beta-prop_EML_2
EIF3I
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
LisH_PAC1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
127948375
NCBI-ProteinID:
XP_052400764
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Position
B1:complement(27053627..27064272)
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AA seq
322 aa
AA seq
DB search
MDPEVESADVICLIMQYLNENHFHRTLAMLQEETAVSLHTVDSIESFISDINNWQWDIVL
LAIQYLKLPDKLLIDLNEQVKFVIKVSLQLNTLGAAQSLLKQTDPMIMLKHTQPERSVYS
HLESLLIKPFFESEEAYPLGSSKEKRRLGTPGDCKGRLHCLKSGKMLKEFRGHTAHINDV
TFSHDGQHIISASADGTVKVWSMKTMDCTHTIKTPDIPVGTDITVNNVVLVPKTTEHFVV
CNRTNTFVVTNIHGQVMRSFSSGTREGVDFVCCTLSPCGEWIYCVGEDYILYCFSTITGK
LERTLTVRSALTAHAAYPRDLF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgaagtggaatccgcagacgtgatttgtctgatcatgcaatacctgaatgaa
aatcattttcatcgcactctggcgatgctacaagaggagacagcagtctctctccacaca
gtcgacagcatcgaaagcttcatctccgatatcaacaactggcaatgggatatagtgctg
ctagcaatccagtatctgaaacttcctgacaagctgctcattgaccttaacgaacaggta
aagtttgtcataaaagtgtcattacaattaaatactctgggagctgctcagtctttacta
aagcaaactgatcccatgatcatgctgaagcacactcaacctgagcgctcagtatactca
cacctggagagccttctcataaaaccattttttgagtcagaagaagcatatccattgggc
agcagtaaagagaagcgcaggctgggaaccccaggggattgcaaaggtaggcttcattgt
ttgaaatcaggaaagatgctaaaggagtttagaggccatacagctcatataaatgacgtc
accttctcacacgatggccagcatatcatcagtgcatcagcagatggcacagtaaaggtc
tggagcatgaagacaatggattgcacccacacaataaaaacccctgacattcctgtgggt
acagacatcactgttaacaacgttgtgcttgtcccaaagactacagagcactttgtagtg
tgcaataggacaaacacgtttgttgttacaaacattcatggccaggtgatgaggagtttc
tcttcaggcacaagagagggggtggactttgtttgctgcacattgtctccatgtggagag
tggatttattgtgtgggagaagactatattctgtactgcttcagcactatcactggcaag
ctagagagaaccctcacagtacggtccgccctcacagcacatgctgcatatccacgagat
ttgttttag
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