Carassius gibelio (silver crucian carp): 127948488
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Entry
127948488 CDS
T08819
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127948488
04082 Neuroactive ligand signaling
127948488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127948488
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127948488
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
127948488
NCBI-ProteinID:
XP_052400906
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Position
B1:complement(13830481..13852134)
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AA seq
512 aa
AA seq
DB search
MNSAGRVTLFLLLIVLITQDCFSSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHIWNDYKLKWAPAEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKYDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPCWVRTVFLRALPRIMLMRRPLDLSESSGK
GGLESGGSSGTGAGKGGEGKKRKNSGSQQGAMNSLEFGEGKAALEGKKGGCPCHPMKEAT
EGDCGKVSRQLNPQAINTVVAFSVVSPEIKQAIESVKYIAENMRSRNKAKEVEDDWKYVA
MVIDRIFLWVFVLVCVLGTMGLFLQPLIGFFS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgcggggagagtcactttgtttttgcttttaattgtcctgataacgcaagat
tgtttctcatctaaaggagaagacaggttgtttcgtcgtttattcaggaggtataatcag
ttcattcggccagtggaaaatgtgtctgaccccgtcacagtggagtttgaggtctctatc
tcacagcttgttaaagtggatgaagtcaatcagatcatggaaacaaatctttggctgaga
catatatggaatgactacaagctgaagtgggcacctgcagagtttgatggaattgagttc
atcagagtcccatcaaataaaatctggaggcctgacattgtactttacaacaatgctgtt
ggggacttcttggtggaggacaaaaccaaagctcttttgaaatatgatggaactatcacg
tgggtccctcctgcaatcttcaaatcatcctgccctatggacatcacatacttccctttt
gactatcagaattgctctatgaagtttggttcctggacctatgacaaggccaagattgac
ttggtacttattggctcaaaggtaaaccttaaagacttctgggagagtggagagtgggag
atcattgatgcacctggttataaacatgacatcaagtacaactgctgtgaagagatctac
ccagacataacttacagtttttacatacggcgactgcccctcttctacactattaacctt
attatcccatgcctcctcatctcctttctgacagtactcgtcttctaccttccatcagac
tgtggtgagaaagtgacattgtgcatctctgtactcctttctcttactgtgttccttctt
gtcatcacggaaaccatcccgtccacttcactcgtgatccctctgataggcgagtacctt
ctcttcacaatgattttcgtcaccctctctattgtcatcaccgtctttgtactgaatgtg
cactatcgcacccctatgacccacactatgccttgctgggtccgtactgtctttctccga
gctttaccccgcattatgctcatgcgccggcctctcgatctatcagagtcttctggaaaa
ggaggactagaaagtgggggctcgtccgggactggagcaggaaaaggaggagagggaaag
aagaggaaaaacagtggatctcagcagggagcaatgaactctttggaatttggagaaggg
aaagcagcattagaaggcaagaaaggcggatgcccatgtcacccaatgaaagaggcaaca
gagggggattgtgggaaagtgagtcgtcagttgaatccacaggctattaacacagttgtg
gctttttctgtggtgtcacccgagatcaaacaggctattgagagtgtgaagtacattgct
gaaaacatgaggagccgcaacaaagccaaagaggtggaggatgattggaaatatgttgcc
atggtgattgaccgcatcttcctttgggtctttgtgctggtgtgtgtgctgggaactatg
ggcctcttcctacaacctctgattggcttcttctcataa
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