Carassius gibelio (silver crucian carp): 127948528
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Entry
127948528 CDS
T08819
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgib00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgib01100
Metabolic pathways
Module
cgib_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
127948528
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
127948528
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgib01003
]
127948528
Enzymes [BR:
cgib01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
127948528
Glycosyltransferases [BR:
cgib01003
]
O-Glycan biosynthesis
Glycosaminoglycan
127948528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
127948528
NCBI-ProteinID:
XP_052400967
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All DBs
Position
A3:complement(14345250..14411585)
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AA seq
921 aa
AA seq
DB search
MFGSLCARKLARRSRSALIAALTVLLVQTLIVWNFSSLDTGEERKDNGREKRDRISINKA
WSEYPKSGFQRRHQHQQPPLGKASVRHKQQPDGYYSHRPKEKVRVDSNNENSVPKDFENI
DNSNFGPRTQTQRHAPSKHKQGLLEKAHAQQSLSKNSNEVIQYAQNKGGFNQTHTKLQRR
ADPTLRPQQSQQHRHHLQQAKRSATPTAGIKYDQPPKCEISGKEAISALSRAKTKECRQQ
IAEVYCRHKERQLMPEKVTRYCPAEGKVNMNVQWEDDSMETVPAVPVRIAFMLVVHGRAS
RQVLRLFKAIYHTSHFYYIHVDQRSNYLHRQMVALAHQYPNVRVTPWRMSTIWGGASLLT
MYLQSMKDLLAMRDWSWDFFINLSAADYPIRTNDQLVAFLSKYRDMNFIKSHGRDNARFI
RKQGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRIFVEYVINSQDDLVTNMKR
FYAYTLLPAESFFHTVLENSPHCQSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDF
KPSDLPRFQQTTRPTFFARKFEASVNQEIVNQLDAFLFGSMPQGTPGLKAYWENVFDEAD
GIHSLSDAHLTHYHAFARLGLARTATSLQGDTSDNSCRYFAMGHPVSVHIYFLSDEFQGY
LVRHHATNLATSKLETLETWVVPKQFFKFTNPPNTFNRLQFAEIGTDWDAKERIFRNFGN
LMGPMDEPVGMQKWGKGSNVTMTVVWIDPTNVIAATYDILIDASAEFTHYRPPLNLPLRP
GMWTVRVLHHWSPVAETRFLITPLTHHKHLPIRQEDALRTHNGPAKNSYMEQSFHGLNPI
LNIPVHLGQVEAAEHNAELTGPELERWVDGLVGEVWSAVDVCSTGPSGCPVMQTCRETIW
SSLSPDPKSQLGSPKTNGRIR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcagtctgtgtgcccgtaagctggctcgccgatcgcggtcagcgttaatcgcc
gcgctgacagtgcttctggtccagacgctcatcgtgtggaacttcagcagtctggacaca
ggagaagagcgaaaagacaacggcagagagaagagggaccgaatcagcatcaacaaagcc
tggagcgagtacccgaagagcggcttccagaggaggcatcagcatcagcagccgccgctg
gggaaagcgtctgttcgacacaaacagcaaccggacggctactactcacaccggcccaag
gagaaagtccgtgtggacagcaacaacgagaactccgttcccaaagacttcgagaatata
gacaacagtaattttgggccgcgtacgcagactcagagacacgcacccagcaagcacaaa
caaggccttctggagaaggcgcatgcgcagcagagcctgagcaagaactccaatgaggtc
attcagtatgcacagaataaaggtggcttcaatcagacacacaccaagcttcagcgaagg
gccgatccaaccctccgtccacagcagtcccagcagcaccggcaccaccttcaacaggcc
aagcgatcggctacgcccaccgccggcatcaagtacgatcagccgcccaaatgcgagatc
agtggcaaagaggcgatctccgccctttctcgtgccaagaccaaggagtgccggcagcag
atagcagaggtttactgccgccacaaagaacggcagctcatgcccgagaaggtcacccgt
tactgccccgcagagggcaaagtgaatatgaatgtgcagtgggaggacgactctatggag
acggttcctgctgtaccggtgcggatagccttcatgttggtggtccacggacgggcctca
cgccaggtgctgcgtctcttcaaggccatataccacacgtctcatttctactacattcat
gtggaccagcgatccaactacctgcacaggcagatggtggctctagctcaccagtatcct
aacgtccgggtcacaccgtggcgcatgtctacgatatggggtggtgccagtctgcttacc
atgtatctgcagagcatgaaggacctgctggccatgcgtgattggtcctgggatttcttc
atcaacctgagtgctgctgattacccaatcaggaccaatgatcagctggtggccttcctg
tccaaatacagagatatgaatttcatcaagtcccacgggagagataacgctcgattcatc
agaaaacaaggtttggaccggcttttcttcgagtgtgacacccatatgtggcggcttgga
gacaggaaaattccagaaggcatatcagttgatggaggctctgactggtttctgttgaac
cgaatctttgtggagtatgtcatcaactctcaagatgaccttgtgaccaacatgaaacgt
ttctatgcatacacacttttacctgcggagtcgttcttccacacggttctggagaacagc
ccacactgccagagcatggtggacaacaaccttcgtatcactaactggaatcgaaagctg
ggctgcaagtgtcaatacaagcacatcgtggactggtgcggctgctcgccgaacgacttc
aagccctcggacctgccccgtttccagcaaaccaccaggcccacgttcttcgccaggaag
tttgaagccagtgtaaatcaagagatagtgaatcagctggacgccttcctgttcgggagt
atgccccagggcacgccgggtctcaaggcctactgggagaatgtttttgatgaagcggat
ggtattcacagcctgtccgacgcgcatctcactcactatcatgccttcgcccgattgggt
ctggcacggactgccacctctttacagggtgacaccagtgacaacagctgcaggtatttt
gccatgggacatcctgtgtctgtccacatctacttcctgtctgatgagttccagggatac
ctggtcaggcatcatgccaccaacctggcaaccagcaaactggaaaccctggagacctgg
gttgtgcccaaacagttcttcaagttcaccaatccacccaataccttcaacagattgcag
tttgcagagattggaacagactgggatgctaaggaaaggatattccggaactttgggaat
ctgatgggacccatggacgagcctgtgggaatgcagaaatgggggaaagggtcaaatgtg
accatgactgtggtgtggattgaccccaccaatgtcatcgctgccacctacgacatcctg
atcgacgccagtgctgagttcactcactacaggcctccgctgaacctgcccctgcggccc
ggcatgtggaccgtacgtgtgctgcaccactggagccctgtggcagagacacgctttctc
atcactcccctgacccaccacaaacacctgcccatacgccaagaggatgctttaagaacg
cacaacggtccggccaagaacagctacatggagcagagtttccatggcttgaaccccatc
ctcaacattccggtgcacctgggtcaggtcgaagcagccgaacacaacgcagagctcacg
gggcccgagctggagcgctgggtggacggtctagtgggcgaggtgtggtcagctgtggac
gtgtgttcaacaggccccagtggctgtccggtcatgcagacttgcagggaaacgatttgg
agctctctcagcccggacccaaagtcccagctgggctcacccaaaaccaacggacgaatc
aggtag
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