Carassius gibelio (silver crucian carp): 127948554
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Entry
127948554 CDS
T08819
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127948554
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127948554
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127948554
NCBI-ProteinID:
XP_052400987
LinkDB
All DBs
Position
B1:27684788..27686788
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AA seq
335 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNTGHTGPNGGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAGSGSGGGVGLGMGASGVGQRLESPVGHGGGTAASYAHMNGWTNGAYSAAAA
AAMMQEAQLAYSQHPGSGAHHHHSHHHHPHNPQPMHRYEMTALQYSPISNSQSYMSASPS
GYGGISYAQHQNSSVASSGAIGALGSLVKSEPSVSPPVTAHSRAPCPGDLREMISMYLPA
AEAGDPSVQSRLHAVPQHYQSSATSVNGTVPLTHI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttgcattccccaggaccccagactaacacaaac
acgggccacacgggccccaacggaggcagcaaagttaaccaagaccgcgtcaagagaccc
atgaacgcgtttatggtgtggtctcggggtcagcgcagaaaaatggctcaggagaaccca
aagatgcacaactcggagatcagcaagcgcctcggagcggagtggaaagtcatgtccgag
gcggaaaaacgacccttcattgacgaggcgaaaagactgcgcgccatgcacatgaaggag
catccggattacaagtaccggccccggaggaagactaagacgctgctcaagaaggacaag
tattctttggccggtggcctgctcgcgggatccggtagcggaggcggcgtgggtctggga
atgggtgcgtcgggggtcggccaaaggttggagagtccggtgggtcacggcggaggcacc
gcggcgagctacgcgcacatgaacggctggaccaacggtgcgtactcggccgcggctgca
gccgcgatgatgcaggaggctcagctcgcctacagccagcacccaggctccggagcgcat
caccaccacagccaccaccaccatccacacaatccccagcctatgcaccgctacgaaatg
acggctctccagtacagccccatctcaaactctcagagctacatgagcgcctcgccgtca
ggctatgggggaatatcctacgcgcaacaccaaaactccagcgtggcttcttctggggcc
atcggcgcgctgggctcgctggtgaaatcggagccgagcgtaagtcctcccgttacagct
cactctcgagccccttgtcccggagacttgcgagagatgataagcatgtatttaccggcg
gcggaggcaggggacccgtcagttcagagcagacttcacgctgtaccgcagcactatcaa
agttccgcgacgagcgtaaacggaaccgttccactgacacacatatga
DBGET
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