KEGG   Carassius gibelio (silver crucian carp): 127948662
Entry
127948662         CDS       T08819                                 
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127948662
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     127948662
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     127948662
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127948662
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD Tudor_3 Rad9_Rad53_bind Tudor_5 PHDvar_NSD
Other DBs
NCBI-GeneID: 127948662
NCBI-ProteinID: XP_052401223
LinkDB
Position
B1:13614888..13634245
AA seq 1496 aa
MAGVGASAPANPACKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKIIPPKGWKPRRN
YDDIDDLVIQAPIQQMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGTLYDEDIKEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRWIN
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQAWTQGKDSCPLDHSLATPSTTPELQSWL
QRRRRKAPSTSSLHYPHACSKRLKTVDSAPEKGGGRRSREAALTSKSEDNEDSIKHQNQS
QYSGLTGPCRQMCVVKVTRVENDLLAHSTRQVKDDSPLLIPTSRQSDLDLGHTSSQTSLI
FNEGRVSTNSNSTAHPGPELTSDSSVTVDVTLDSERTAESPYRRTKLNCEPVSIKSALSI
PVTHSARLNSTGTAILFSETDSQQSKIETEEQVADLLTENSIDCCTSALYKEQSSIRLDS
ALQGLETSENRTNAEIHNASFSEMPLLMPELIEERVNPQSLAPEMPSLTLAVRPDTTNHR
PHSPNINAPVLYLEKSHSPPVTTDDVGTCSERHFPDWLFVALQEGASQTQNSISDTFRAK
PASPSLVSKWGPPEESKQEGYEHIPSADRNTQNESISKITSQSILQCSTVADVDSMDTCD
SEMASGDKQSSLSLQEQLTCSQGPYMESKPFTIWKNLSSQNPAVLIESLQPELVVGLTTG
VSSLTDYAHDSLPYTMWSESGCQKEKFPDSPNSSPCTQTWTNLEPIPMQCHIGDMAPNAP
PDLKEQYLELEPAEACVLREQTDSQEPQEEEFKGQEYYEGPKSEDDGSVSDSDSCESGNK
GADSSSESSEENAMSDPEYVETSLEPGEVCTYHMQTVKKIAKSWRHPLRKPTARAVPSAV
KQQAASDDETLEDCATKEEEPEAEEWAKPLAHLWQHRKAHFQYEREYNTTAAKTSPHCAV
CTLFMPYYQPDHFEERRHDVLMNAATESLGSSSQEAGLRSQPLIPEICFAYQEGPCPLNT
LLEEDGSSPLVACNSCCVQVHASCYGVATHDVSPVWTCDRCVSGDLAAGCCLCNLRGGAL
KRTSDDRWVHVMCAVGLPEVKFIDVVKRAPIDISAIPVQRYKLKCIYCRNRIKKLSGACI
QCLCGRCPTSFHVTCAHAAGVLMEPDDWPYVVFITCHRHQSRSSSSKVKVSKSELELGQT
VISKHKNLRYYSSCVTQVMAQTFYEVMFDDGSFSNDTFPEDIVSRDCAQLGPPEVGEAVQ
VKWPDGLFYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYTLDEDLPKNVKGRLSTASSM
RFQDAFFTTQGERKRQRTPNSRFQTDFIAHISPRTFTRNSETCSKANKWKNGEGLF
NT seq 4491 nt   +upstreamnt  +downstreamnt
atggcaggtgttggggcaagtgccccggctaaccctgcgtgtaagatcatgaccttcaga
cctaccatggaggagtttaaggactttaaccagtacctggtttacatggagtctcaggga
gctcatcgtgctggactggccaagattattccacccaagggctggaagccacgtcgcaat
tacgatgatattgatgatttggtcattcaagcacctattcagcagatggtggctggccaa
tcaggactcttcacccagtacaacatccagaagaaaccgctcactgtgcaagaattccgc
agactggccaacagtgacatgtactgcacacctcgctacctgaactatgaagacctggag
aggaagtactggaagaatctgacattcgtctcgcccatctatggtgctgatgtgagcggc
acactctatgatgaggacattaaggagtggaacatcgggcacctgaactcaatcttggat
gtgattgaagaggattgtggagtgtccattcagggtgtaaacacaccctatctgtacttt
ggaatgtggaaaaccagcttctcctggcacacggaggacatggacctctacagcatcaac
tacctgcactttggggagcccaaatcctggtatgccatccctccagagcatgggaagaga
ttggaacgtcttgccataggtttctttcctaacagttttaaaagctgtgaggcgttcctg
agacacaagatgacactgatatccccctctgtactaaagaaatacagcataccatttgat
aagataacacaggaagcgggggagtttatgatcacgtttccctatggttaccacgctggc
ttcaaccacggcttcaactgtgctgaatccaccaatttcgctagtatccggtggatcaat
tatggaaaagttgctacgcagtgtacatgcagtaaggacatggtgaagatctccatggat
ccatttgttagacgattccagccagatcgctatcaggcttggacacaaggcaaagactca
tgtccattggatcacagcttggccacacctagcaccacaccggagctgcagagctggctt
cagaggcgtcgcaggaaagcaccttccacctcaagtctccattatccacatgcatgctcc
aaacgactgaagactgtggactctgcaccagagaaagggggtggacgcagaagtagagaa
gcagctttaacatcgaaaagcgaggataatgaagactcaataaaacaccagaatcaatca
cagtactcagggctcactggtccatgccgacaaatgtgtgttgtgaaagtaacaagagtg
gagaatgacttgctggcccactccaccagacaagtcaaagatgattcccctctactcatc
cccacatccaggcagagtgatctcgatctaggtcatacaagctcccagacatctttaatt
ttcaatgaaggtcgagtatccacaaactcaaactccactgcacaccctggacctgaatta
acctcagacagcagcgtcactgtagatgtgactctggactcagaaagaactgctgaaagt
ccttatcgaaggactaaactaaactgtgaacctgtttcaataaagagtgctctttctatt
cctgtgacccattcagcgagacttaattccactggtactgccattttattttcagaaact
gattcccaacaatctaaaattgaaactgaagagcaggttgccgatctcttgactgagaac
agcattgattgctgcacatcagcactttacaaagagcaaagctcgatccgtctagactct
gctcttcagggtttggaaacctcagaaaacagaacaaacgctgaaatccacaatgcttca
tttagtgaaatgcctcttctaatgcccgagctcatagaagagagagtcaatcctcaatct
ctcgcacctgaaatgccctcgctgactctcgctgtccgaccagacaccacaaatcacaga
cctcacagtcccaacattaatgcacctgttctctatctggaaaaatcacactctcctcct
gttacaaccgatgatgtggggacttgttctgaaagacattttcccgattggctctttgtt
gcactccaagaaggtgcaagccaaacacaaaactcaatctcagacacctttagagcaaaa
ccagcatctccttccttagtttcaaaatgggggccaccagaggaatccaaacaggaagga
tatgaacacatcccatccgcagacaggaacactcaaaatgagtccatttctaaaatcact
agtcagagtattttacaatgttctaccgtagcagatgtggattcaatggacacctgtgac
tctgaaatggccagtggagacaaacaaagttctctcagtctccaagagcagctcacatgc
tcccagggcccctacatggagtccaaacccttcaccatttggaaaaacctcagctcccag
aatcctgcagtgctcatcgagagcttgcagcctgagctggtagttggtcttaccacaggt
gtgagcagtcttacagattatgcccatgactcgctgccctacaccatgtggtccgaatca
gggtgccaaaaagaaaagttccctgattctccaaactcttcaccatgcactcagacttgg
accaacctggagcccattcctatgcagtgccatattggagacatggctccaaacgcacct
cctgatctgaaggagcagtacctggagttggaaccagctgaagcttgtgtgctccgtgag
cagacagactctcaggaacctcaggaggaagagtttaaaggtcaggagtattatgaaggt
ccaaagtcagaggacgatgggtctgtgagcgactctgattcgtgtgaatcagggaataaa
ggtgctgacagcagcagtgaatccagtgaggagaacgccatgagtgaccctgagtatgtg
gaaacgagtttggagccaggggaagtctgtacatatcacatgcaaactgttaagaagata
gccaagagttggcgtcaccccctcagaaaacccactgcaagagcagtgccaagtgctgtg
aaacagcaggctgccagcgatgatgagactttagaggactgtgcaactaaagaagaggaa
ccagaagctgaggaatgggcaaagcctttagcacatctgtggcaacacagaaaagctcat
tttcaatatgaacgagaatacaacacaactgcagctaaaacctctccacactgtgctgtc
tgcacccttttcatgccatactatcagcctgatcattttgaggagagaaggcatgatgtc
ttgatgaatgctgccacagagtctctgggatcatcttcacaggaggcgggcttgagatca
caacctctgattcctgaaatttgctttgcttaccaggagggtccatgtcccttgaacaca
cttctagaggaggatggatccagtcctcttgtggcctgtaatagttgctgtgttcaagtt
catgccagttgctacggtgttgctactcatgatgtcagtccagtgtggacatgcgacaga
tgtgtgagcggagacctggcagctggatgctgtttgtgtaacctgaggggaggtgcatta
aaaagaacctcagatgacagatgggtccatgtgatgtgtgctgtgggtctccctgaggtg
aagttcattgatgtggtgaagagagctcctattgacatcagtgccatacctgtacagaga
tataaactgaagtgtatatattgccgtaacaggataaagaagctgtccggagcatgtatt
cagtgcttgtgtggtcgttgcccaacctctttccatgtcacttgtgcacacgcagcagga
gtgctcatggagcctgatgattggccgtatgtggttttcatcacctgtcacaggcaccag
tcacggagctccagttctaaagtgaaagttagcaaaagtgaattagaacttggccagacg
gtgatctccaaacacaaaaatcttcgttactacagctcctgtgttacccaggtcatggcc
cagacattctatgaggttatgtttgatgatggctcattcagcaatgatacattccctgaa
gacattgtgagcagagattgtgcccagcttgggcctcctgaagtgggggaggctgttcag
gtgaagtggcctgatggacttttttatggagccaagtaccttggctctaatacttcatat
atgtatcaggttgaatttgaagatggatcccaggtattggcgaagagagaggacatttac
acgctggatgaagacctgcccaaaaatgtcaaaggtcgtttgtccacggcatccagcatg
cgtttccaggatgcgttcttcaccacacaaggtgaaaggaaacggcaacgcacaccaaat
tcacggtttcagacggattttattgcccacattagccctcgaaccttcaccaggaactca
gaaacatgcagtaaagccaacaaatggaagaatggagaggggctgttttaa

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