Carassius gibelio (silver crucian carp): 127948680
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Entry
127948680 CDS
T08819
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127948680
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127948680
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127948680
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127948680
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127948680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
127948680
NCBI-ProteinID:
XP_052401265
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All DBs
Position
B1:10428901..10462616
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AA seq
1329 aa
AA seq
DB search
MGSRSVGAVHSARCYLVLILQLLTQLPSTNSVLRYHVAEEGPTDVHIGNVASDLGLSTSG
IGTGDVTFALESGSEYFKIDNVTGELTTGSKRIDREKLQQCQMIFDENECFLNFEVSVIG
PLQSWVDLFDGRIVVTDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGID
RYELIQDSRDGGSSLRRPANGPTNGNGGDRRRVSETGAGPASRSSVFELQVADTPEGQKQ
PQLIVKGPLDREARDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPRFERAVYEAEM
AENAPPGTPVLQVRATDRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDREE
VSQLRFIITARDRGQPPRTDRTTVVLNVRDENDNVPIVEIRKIGRILVRDGAAMVPENVL
VDTPVALVQVSDHDQGENGAVTCTVVGDVPFTLKPAGETALAPPPATDDAFERNKKKYFL
HTSALLDYEAIREYSVTIVAVDSGSPSLSSNSSLLVRVVDINDHAPTFAQSLVEVHFAEN
NAPGERVVTVVASDADSGKNAEIAFSLDPSVNGAFYIDADNGDIRATGALDREQRERYEF
RVIARDKGTPSLQGSATVIVQVTDRNDNAPKFVQEVFTFYVKENLLTNSPVGMVTVTDAD
EGENAELSLFVEHDEEEGGEEGKEGKQEVFSIENNTGTIFSSASFDRERCSTYSFRVRAV
DGGEPPRSATATISLFVTDENDNAPSITSPANESYTLLPPASGARTVVRTVSASDGDTGS
NADLRYALVGGNPFRLFEIGSSSGVITLAEPLERRHRGLHRLVVRVNDSGMPSLCATALV
HVFINESLANATLVDAQVARSLAVPLYMDIAGDPDSERALGKQRLSVAIGVLAGAAAVIL
VILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPQPPPLQAQGSQNERGRKPRRDKRNNGT
AKSERSLYSGIMTVNGCRRGGGDEEEEDEDASSASERIAARYCAAANGDPSSPRLGSRRH
QSSPDLARHYKSSSPLPAVHLQPNSPPVEGKKHQAVQELPPTNTFTGNGTGNADAMSLSS
DQCSDYGCQTVKYSKQPLRRVTFSVVSQAPDQGCYDSGVEDSETPSSKSSSGPRLGSLPL
PEDGYERTTPEGSVGEEEHVENDPRQLPDVALTGKCTRECDEIGHSDTCWMPVQPSPRRR
LEPPQLSTFASPGDNNNNTEDDSDREEDGDGGTDKSSGGSEEVRDSLANGDPLGTLSRRD
RNRNMGDHNRNLLNRKMTSASYDTFSSAGFGRRPDEEDSHPPEVIPLTRTGGDYKTTSCL
TLSRREVYL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggagcgttggcgcagtgcactccgcgcgctgctacctcgtgcttatcctg
cagctgctgactcagctcccgagcaccaattcagtgctgcgctaccacgtggcagaagag
gggccgaccgatgtgcatattgggaatgtggcttcagacctggggctgtccacctctggg
atcgggactggtgatgtaactttcgctttggaatctggctcagaatacttcaaaattgac
aatgtcactggagagcttactacaggcagcaagaggattgacagagagaagctgcagcag
tgtcagatgatttttgatgaaaatgagtgctttttgaactttgaggtgtcagtcataggt
cccctacagagttgggtggatctgttcgatggccgtattgtagtcacagacatcaatgac
aacaccccctccttcccttcaccagtactgactctgtctgttgaggagaatcggccaatc
ggcacactctatctccttcccacagccacagaccgtgattttggtcgcaatggcattgat
cgctatgagctaatccaggacagtagagatggggggtcatctttgcggcgacctgcaaac
ggaccgaccaatgggaacggtggtgaccgaaggagagtgtcagaaacaggggcaggacct
gccagcagaagcagtgtgtttgaactgcaagttgccgacacacctgaaggacagaaacag
ccccagctgattgtgaaagggccgctggaccgcgaagcacgcgattcttatgaactcgtg
ctacgggttcgtgatggcggcaaccctccccgctcctcacaagctctgttacgagtgtcc
atcacagacgtcaatgacaacagtccacgctttgagagagctgtgtatgaagcagaaatg
gcagaaaacgccccacctggcacacctgtcctgcaagtgcgcgccacagaccgtgatgtc
ggcgtaaatgggcaggttgagtatgtgtttggagcagctacagaatcagtgaggcgcctc
ctgagattggatgaagcatcaggatggctgagtgttctgcatcgcatagaccgcgaggaa
gtttcgcagctacgcttcatcatcacagctcgtgaccgcggccaaccacctcgcactgac
cgcactacagttgttctgaatgtaagggatgaaaatgacaacgtacccatagtggaaatt
cgaaaaattggacgaatccttgttcgggatggcgctgcaatggttccagagaacgtgttg
gtggacactccagtagcattagtgcaggtgtcagaccacgaccagggagagaatggtgcg
gttacctgcactgttgtcggcgatgtgccattcacattgaaaccggcgggtgagacagcc
ctagcgcctccaccagccacggatgatgcctttgaacgaaacaaaaagaaatattttctc
cacacctcggcacttttggattacgaagctattcgtgagtatagtgtcactatcgtggca
gtggactccggtagcccaagcctctctagtaatagttccctcctggtacgtgtggtggac
atcaatgaccatgctcccacttttgcccagagcttagtggaagtgcattttgctgagaat
aatgccccaggagaacgagtggtcacagtagtggcttctgatgcagacagtggtaagaat
gcagagatcgcattctcacttgatccatctgttaatggagctttttacattgatgccgat
aatggtgatattcgtgccactggggcactagatagagagcagagggaacgctatgaattt
cgtgtaatagctcgagataagggcaccccatctctgcaaggctctgctactgtcatagtt
caggtcacagacaggaatgacaatgcccccaaatttgtccaggaagtcttcacattctac
gtcaaagagaacctgctcaccaatagccccgtcggcatggtgactgtcaccgatgcagat
gaaggcgagaatgcagagttgagtctttttgttgagcacgatgaagaagagggtggagaa
gagggcaaagaggggaagcaagaagttttctccattgaaaataacactggaaccattttc
tcttcagcatcctttgaccgtgagcgctgtagcacatactcattccgtgtgcgtgctgtt
gatggtggagaaccgccacggtctgccaccgccaccatatccctgtttgtcactgatgaa
aatgacaatgcaccatccatcacatcacccgctaatgaatcatacaccctccttccaccc
gctagtggggctcggactgtagtccgcacagtctcagcctccgatggcgacacaggatct
aatgccgatctgcgctacgctctggtaggcggaaacccttttcgtctgtttgagattggc
tcaagtagtggggtcataaccttggcagagcccctggagagaagacacaggggtctgcac
cgcttggtggtccgggtcaatgacagtggcatgccttccctttgtgccacagcactggtg
catgtcttcatcaatgagagcttggccaatgctacgctcgtggatgcacaggtggcccgg
agtcttgcagtccctctctatatggatattgcaggtgacccagacagcgagagagctttg
ggtaaacagcgcctgagcgttgccatcggtgtcctggctggtgctgctgctgttattctg
gtgatccttctggttgtgacagcacgacagtgtggggcacagggtaagaatggctatgag
gctgggaagaaagagccagaagaggactttttcagtccacaacctccccctttgcaagcc
cagggctcccaaaatgaacgtgggcggaaaccacgcagagacaagcgtaataacggtact
gccaaatctgagcgttctttatacagtggaattatgacggtgaatggctgcagacgtggg
ggaggcgatgaagaagaggaggatgaagacgctagcagtgccagcgagaggattgcagca
cgttactgtgcagcagctaacggagacccaagcagtccaagactaggctcaagacgtcac
caatcaagtccagatctggcccgccactacaagtccagctcacctttgcccgcagtccat
cttcagcccaactcaccacccgtggaaggcaagaagcaccaagctgtgcaggaactgccc
cccactaacaccttcactggcaacggcaccggtaatgcagacgccatgtcactcagctca
gaccaatgctccgattacggctgccaaactgtcaagtacagcaaacagcccctcagaaga
gtgacattttctgtggtgagtcaggctcctgatcaaggctgttatgatagtggagtggag
gactctgagaccccaagcagcaagagctcttctggacccagactgggatctttaccgttg
cccgaggatggatatgaaaggacaacaccagaagggagcgtaggcgaagaggagcatgtg
gaaaatgaccccaggcagctccctgacgtggctctgacaggaaagtgcacacgagaatgt
gatgaaattggtcactctgacacctgctggatgcctgtgcaaccatcaccgcgcagacgc
ctggaaccgccccaactgtccaccttcgcctcgcccggcgataacaacaacaacacggag
gacgacagcgaccgagaggaagatggagatggaggtacggataagagcagcggaggaagc
gaggaggtccgggattcgctcgcaaatggagatccactcggaacgctcagccgtcgagac
cggaacaggaacatgggcgaccacaaccgcaatctcctgaaccggaaaatgacctcggca
tcctatgacacgttcagcagcgccggctttggccgtcgtccagatgaagaagactcacac
cccccagaggtcattccgcttacaaggacggggggcgactataagaccacctcgtgcctc
actctttctcgcagggaagtgtacctgtga
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