Carassius gibelio (silver crucian carp): 127948864
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Entry
127948864 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127948864
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127948864
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127948864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
127948864
NCBI-ProteinID:
XP_052401617
LinkDB
All DBs
Position
B1:12260402..12289537
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AA seq
670 aa
AA seq
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MPIATTGHSASREPRVCSPDPVPKRADLCEGAGAQPTEYGGSEGGHSLGSTRFSGALESS
SAASHSPPSSPFLHHHHHHHHHPHPVTMEPPRTRSRSRSGFYHGGLSNSNSNAGSGGGAL
SPAGGLSHHHHQQQLGAAHGHTENLRPPGNMLSPGAHRYTGPGTHRNSGAGAMGGVYHYH
SEHACADATDKTEDSPSPKRQRLSQQSVLEFTSAPPSTPSPPIRPWELPPSRRPHPYPHP
HYHPERCHTPARHRRSPPVRRQRGRRERLSRHHPPHGSPGGGQDENYRHHPHPHSLHPYG
QPPSHPPPGLDEPRAFHPPTLSPRLLHPPQQGAIMMDLHEQLPQGTVPVSYTVSPVPPHG
LPAPLCTGQHLPACSSQQQVPTCSVVFSGQQHYPICSVPPPMLPPCSVQHLPMPYAAFPS
LLSSDPPFLLHPPHLSHHPPHLPTPGQFLPFQTQQSRSPLQRIENEVELLGEHLSVGGGF
NYPHSGHPSPLPPSTPLQFLSHEPLPQELFGVPYPHFMPRRITGRRYRSQQPVPPPPYHP
SLLPYFLSVLPVQPTAVGPTISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKADIEQ
LPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRA
DASEVQRDSE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgctactactggtcattcagcgtctcgagagccccgcgtctgttccccggac
cctgtccccaagcgtgctgatttatgcgagggcgcaggggcccagccaacagaatacggg
ggttcggaggggggccacagcctaggcagcactagattctctggagcacttgagagctct
tctgcggcttctcattcacctccctcttcccctttcctccaccaccaccatcatcatcat
catcacccccatccagtgactatggagccccccaggactcgatcacgctcgcggtctgga
ttttaccacggtggattatctaactcgaacagtaatgctgggagtggtggcggtgcacta
agtccagctggaggactaagccaccaccaccaccaacagcagctcggagctgctcatgga
cacacggaaaacctgcgcccgcccgggaacatgctttccccaggcgcccacagatacacg
gggcctggaacgcacagaaactccggagcaggtgcaatgggaggagtataccactatcat
tcagagcatgcgtgtgctgacgccactgacaagacggaggattctcccagtccgaagaga
cagcgtctttctcagcagtctgtactggagtttacctctgctcctccttccacaccctca
ccaccaatcagaccatgggagcttccgcccagtcgcaggccacacccctatccccaccca
cactaccaccctgagcgctgccacacacctgcacggcacagacgcagtcctccagtgcgg
cgtcagcgcggtcggcgagagcgtctgtcgcggcaccatccccctcatgggtccccgggt
gggggacaggatgaaaactatcgccaccatcctcacccacattctcttcatccctacggc
cagccaccatcccaccctccacccggcctagatgagccccgggcctttcacccccccacg
ctctcgccacggttattgcaccccccgcagcagggagctattatgatggatctccacgag
cagctccctcagggtacagttccggtgtcatatacagtttctccagtgccgccccatggt
ctacctgcccccctctgcacgggacagcatctcccagcatgttcttctcaacagcaggtg
cccacctgttctgtggtcttcagtggacagcaacactatccaatctgtagcgtacctcct
cctatgttgccgccatgttcagtgcagcatttgccaatgccgtacgccgcatttccttct
ctcctctccagtgatcccccgttcctgcttcatccgccgcatctatcacatcatccgccc
cacctccccacgcctggacagttcttacccttccagacgcaacagtctcgatctccgctg
cagaggatagagaatgaggttgagttattgggggaacacctgtcggtaggtggagggttt
aactatccccattcgggacatcctagtcctctgcccccttccaccccactgcagttcctc
tcccatgaacccctgccccaggagctctttggagtgccgtatccacacttcatgcctcgg
cgaatcacaggcagacgttaccgctctcagcagcctgtacctccacctccttaccaccca
agtctgctgccctacttcctatctgttcttccagtccagccaacagcagtgggtcccacc
attagcttggagctggatgtagatgatggagaggttgagaattatgaggctctgttaaac
cttgcggagcgtcttggagaagcgaagcctagaggtttgacaaaagccgatatcgaacag
ctgccttcctacagattcaaccccagcaaccatcagtcagagcagactttgtgtgtagtg
tgcatgtgtgattttgagtctcgtcaactgttgagagtactgccctgtaatcatgaattc
catgccaagtgtgtcgacaaatggctgaaggctaacagaacctgtcctatttgccgagcc
gatgcctctgaagtccagcgggattctgagtga
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