Carassius gibelio (silver crucian carp): 127948982
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Entry
127948982 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127948982
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127948982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
TEN_NHL
zf-RING_5
RING_XB3-XBAT31
Mala_s_1-like
zf-C3HC4_4
SBBP
zf-ANAPC11
PML_CC
Prok-RING_4
Invasin_D3
zf-RING_11
Anticodon_2
DUF5320
Baculo_PEP_C
DUF7310
NPV_P10
Motif
Other DBs
NCBI-GeneID:
127948982
NCBI-ProteinID:
XP_052401835
LinkDB
All DBs
Position
B1:complement(15636890..15675203)
Genome browser
AA seq
744 aa
AA seq
DB search
MATEASTLPSPVVRQIDKQFLICSICLDRYNNPKVLPCLHTFCEKCLQNYIPAHSLTLSC
PVCRQTSILPEEGVAALQSNFFITNLMEVLKRSPDTNLSEDCSDAINGVATGQPLSCPNH
GGNVMEFYCPPCETAMCEECTCGEHAEHATVPLKDVLEQHKASLQEQLDAVKNRLPEIDS
ALEVLSDILQQLSNQKSSIEEVIHATFEELQKTLNVRKSVLLMELEVNYGLKQKVLQAQL
ESLLQGQEGIRSSCSFTEQALNHGSEAEVLLVKKQMSERLDELASQELPLRPEENSQLDF
LVETDGLRKSIHNLGAIITTNAVAAETVATGEGLRHCIVGQPTSVTITTKDRDGGLCRTG
NALLIADLSASDGTVVGEGEVTDHKNGTYEFVYTVPCEGRFTLSLKLYDQHIRGSPFSIR
ANKLTDLSLTADGGKKHLKSPGSSHVKQRAIKRPASMYSTGKRKENPIEDDLMFRIGTKG
RNKGEFTNLQGVAASSIGKVLIADSNNQCVQIFSNDGLFKSRFGVRGRSPGQLQRPTGVA
VHPNGDIIIADYDNKWVSIFSCDGKFKAKIGSGKLMGPKGVAVDRNGHIIVVDNKSCCVF
IFQPNGKLVSKFGNRGNSDKQFAGPHFAAVNQNNEIIVTDFHNHSVKVFSPEGEFLLKFG
SNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSADPLYGPQGLA
LTSDGHIVVADSGNHCFKVYRYLQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaagcttctaccctcccaagtcctgtcgtgcgtcagatcgacaaacagttc
ctgatttgtagcatctgtctggatcgctacaacaatcccaaggtccttccctgccttcac
accttctgtgaaaagtgtctgcagaactacattcccgcccacagtctgactctgtcttgc
cccgtgtgccgtcagacctccatcctgccagaggagggtgtggcggcacttcagagtaat
ttcttcatcaccaacctgatggaagtgctaaagaggagcccagacactaacctcagtgag
gactgctccgacgctatcaacggagtggccactggacagccactctcctgtcccaatcat
ggaggaaatgtaatggagttctactgtccaccatgtgagacagccatgtgtgaggagtgt
acttgcggcgaacatgcagaacacgccaccgtcccgctcaaggatgttctagaacagcac
aaagcctcgctacaggagcagctggacgctgtcaaaaacagactgccagaaattgactct
gcgctggaggttttgtctgatattctacagcaactgagcaatcagaagagttcaatagaa
gaagtgattcatgcaacttttgaggagcttcagaagaccctaaacgtacgcaaaagtgtt
ctgctgatggagctggaggtcaactacggactcaaacagaaggtgttgcaagcccagctg
gagtcgttgctgcagggacaggagggaattcgcagcagctgcagtttcacagagcaggct
cttaatcacggctcggaagctgaagtcctattggtcaagaagcagatgagtgagcgtctt
gatgagctggcaagtcaggagctcccacttcggccggaggagaacagccagctggacttc
ttggtggagaccgacggtcttcgcaaatccatccacaacctcggtgctataataaccacc
aatgctgttgctgcagaaactgttgcgaccggtgaaggcctgaggcattgtatcgtgggg
cagcctacttctgtgaccataacaacaaaagacagagacggcggactgtgccggacagga
aatgctctgctaatagctgatctttctgcctctgatggcaccgtagtgggggaaggtgaa
gtcacagatcataaaaatggcacttatgagtttgtatacacggtcccgtgtgagggccgc
ttcaccctctcactaaagctctatgatcagcatattaggggcagcccattcagcatacgt
gccaacaaattgacagacctctccctgactgcagacggaggcaaaaaacatctcaaatct
ccaggaagtagccatgtgaaacagcgtgctatcaagcgccccgccagcatgtacagcacg
ggcaaacggaaagaaaacccaattgaagatgacctcatgtttcgaatcggaactaaaggc
agaaataagggtgaattcaccaatctgcagggagttgctgcttcttctattgggaaggtc
ctgatagcggatagtaataatcagtgtgttcagatcttttcaaatgatggactatttaag
agtcgttttggagtgaggggccggtcaccaggacaacttcaacggccaactggtgttgct
gtgcacccaaatggtgacatcatcattgctgactatgataacaaatgggtcagcattttc
tcctgtgatggcaagtttaaggctaaaattggctcagggaagctcatgggtcctaagggt
gtagcggttgatagaaatggccacatcattgtggttgacaataaatcctgctgcgtcttc
atttttcagcccaatggaaaacttgtatctaagtttggaaaccgaggcaacagtgacaag
cagtttgcaggtccacactttgccgcagtgaatcaaaacaatgaaatcattgtgactgat
tttcataatcattctgtaaaggtgttcagtccagagggtgagttcctactgaagtttggg
tcaaatggtgaaggaaacggtcagtttaatgcaccgacaggtgtggcagtagattccaat
ggcaatattatagtggctgactggggcaacagccgcatacaggtgtttgacagcagtgga
tccttcctgtcctacatcaacacctccgcagaccctctgtatggcccacaaggcttggct
ctgacttcagatggccacattgtggtggcagactctgggaaccattgttttaaagtctac
cgttatctacaatag
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