Carassius gibelio (silver crucian carp): 127949061
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Entry
127949061 CDS
T08819
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127949061
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127949061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127949061
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127949061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
DUF7447
Motif
Other DBs
NCBI-GeneID:
127949061
NCBI-ProteinID:
XP_052401966
LinkDB
All DBs
Position
B1:30700071..30732904
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLHYPPFEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFTDAKKILLYSQQDK
SFDGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSEFLENNASLPQHAVRQIVEANVNLE
KVLIKGFGVHLRDLCNTTSLEDFVTIADKNVSQLTQNIICQSSAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIFQDVSIATDSLLESLGALAVELVSMKSWRDMRNEIQYLTGNSSQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDSDSEPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQELGVLRDLGGM
WEEMRPKVWNFMESSEEMDLVRTLLQNNASARFFNAKLSGTNWRVEDVSSFLSKASEDTR
PHGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMHLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
LVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYSLTTSISLMLFDSLLYA
VMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGGITSAPTNKKENAEAVCIEEEPAHL
DPGVYIENLVKVYSNGKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTDLNTIRQNLGVCPQHNVLFSMLTVEEHIWFYASLKGLSEEKVKSEMEQIV
MDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SVSSCRTSSSTVSYSKASLKKEDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGIIPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFSFISNDAPEDRHTNKLLEALMDNPTYNEQCTDQKNAASKSCPIKD
GDWMVPEIPRTIQDIFVKGNWSMENPSPLCECSCEGSKKMLPECPPGAGGLPPPQIKVTI
NETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGDEITV
AIAHIRNRFSLQTGTAADRFLGSLSTFIRGLDTKNNVKIWFNNKGWHSMGAFLNVMNNAV
LRANLPPGLDQSKFSIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGVIFFCITVLIQYRFCIKARSVSTKLKPIGEEDEDVARERQRILCGGGHTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVTGADPQLE
PVMEFIERELPGSTLKEKHRNMLQYQLSSSLTSLARIFSLLSKNKEQLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDISINKNDAIVEMSHLNAFLVDEKAKETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagttgggtttgctgttgtggaagaacttcacttaccgacggaga
caaactattcagctgctgatcgagatcatatggccactcttcatctttttcatcttgata
tctgtcagactccactatcctccattcgagcaacatgaatgccactttcccaacaaggcc
atgccctctgcagggactttaccatgggtacagggcatcatctgcaatgccaacaacccc
tgctttcgctaccccacccctggagagacccccggggtggtgggcaacttcaatgactcc
atcatctcccgactgttcaccgatgccaagaaaattctcctctacagccaacaggacaag
agctttgacggttttaaaggactggtccgggccttgagaaaactgcagagaaacactgaa
gggttcaagctgaaggacttcctccgtgataatgaaacgttgtctgagtttcttgagaat
aatgctagcctgccccagcatgctgtgagacagatagtggaggctaacgtcaacttggag
aaggttcttattaaaggcttcggtgttcatctcagagacctgtgcaataccacctctctg
gaggatttcgtgactatagccgataagaacgtgtctcagctgacgcaaaacatcatctgt
cagtcgtctgctgaatggctgaataacgcagagagccacttcctgtccaacctggacttc
ctgaagccaatacggaaagatgtcaagtctgacccgaagattttccaagatgtgtctata
gcaacagacagtcttctggagagtttgggagcgttagcggtggagcttgtgagtatgaag
agctggcgggacatgcgcaatgagatccagtacctgacgggcaacagctcgcagtccccc
aaccacatgtaccaggccgtgtcccgcatcgtctgcggtcacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggaaactac
ggcaatgacagcgacagcgagcccgtttccgtctacgacaactcctccacgccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagagctctg
aagccgctgctcatggggaagatcctgtacaccccagacacccctgccacccagaggatc
attcaagaggtcaataagacgtttcaggagctcggtgtgctcagggacctcggtggcatg
tgggaagagatgagacccaaagtatggaacttcatggagagtagtgaggaaatggacctc
gttcggacactcctccagaacaacgctagcgctcgcttctttaacgccaagctgagcggg
acgaactggcgtgtggaggacgtgtccagctttctgtccaaagcttcagaggacacgcgt
ccccatggttcagcgtacacatggagggaagtgttcaacgagacggatcaggccatccag
accatctcacggttcatggagtgtgtgaacttggataagctggagccggtggctaatgag
gagcgtttggtaaacaagtccatgcatctactggatgaccgcaagttttgggcggggata
gtgtttcctgacatgcaggccaacacatctgacctgccgcccaacgtcaattacaagatc
cgcatggacatcgataacgtggagcgcaccaacaagatcaaggacggatattgggatccc
ggtcctcgagcggacccgtttgaagacctgcggtacatctggggtggcttctcctacctg
caggacgtgattgaacacgggatcatacgagctctgaccggcagcaaggagaaaacgggc
gtttacatccagcagatgccgtatccctgctatgtggatgacattttcctgcgggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatc
aagggtgtggtgtacgagaaggaagcccggctcaaggagaccatgaggattatgggtctg
gataatggtatattgtggctgagctggttcatcagtagtctgatcccactgctcatcagc
gccgccctgctggtgctcatcctgaagatggggaatctgctgccgtacagtgatcctggt
gtagtctacttgttcctggcctcgtttgcggtggtgaccatcatgcagtgtttcttgatc
agcacgctgttctcccgcgctaacctcgccgcggcctgcgggggcatcatatacttcacc
ctctaccttccctatgtgctgtgcgtggcctggcaggattacgtcggctttggtgccaaa
ctagtagtgagcctcttgtccccggtggcgttcggcttcggctgtgagtactttgctctt
ttcgaggagcagggtgtgggcatccagtggagtaacctgctctccagccccatgcaggag
gacagctacagtctcaccacatccatctcgctcatgctcttcgattcgctgctctacgcc
gtcatgacctggtacattgaagctgtgtttccaggtcaatacggcatcccacgaccctgg
tacttccccttcaccaagtcatactggtgcggagagaaatgtggggggattacatcagca
ccgaccaacaagaaagaaaatgctgaagctgtgtgcattgaagaagaaccggctcacctg
gatccaggtgtttacatcgagaacctggtgaaggtttacagcaacggcaaactagcagtg
gacgatttgactctgggtttttatgagggtcagatcacctccttcctgggtcacaacggt
gctgggaaaaccacaaccatgtctatcctcactggcctgtttcctcccacctcgggcacc
gcttacatccagggcaaagacatccgcaccgatctgaacactatacgccaaaacctgggc
gtctgtccgcagcataacgtcctatttagcatgctcaccgtggaggagcacatctggttt
tatgcaagtctgaagggtttgtctgaggagaaggtgaagtcggagatggagcagatcgtg
atggacctcggcctgcctcataaacgcaaatctcgcaccagccagctctcaggaggaatg
cagaggaagttatcagtagcgctggcgtttgttggagggtcaaaggtcgtgattctggat
gagcccacagctggagttgatccttacgctcgccggggcatctgggacctgctgctcaag
tatcgccaaggacgcaccatcatcctgtccacccaccacatggacgaagccgatatcctg
ggggatcgcattgccatcatctcccacgggaagctgtgttgtgtgggctcctctctgttc
ctcaagacccagctggggacgggatattacctgacgctggtgaagaaggacttcgatctc
tcggtcagctcctgccgcacctccagcagcaccgtctcctactccaaagcaagccttaag
aaggaggacagtgtatctgagagcagctctgatgctggactgggcagcgaccatgaaagt
gaaaccaccacaatagacatctccttgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagatctcgggcacgagatcacttacgttctgccttacgagtcggcc
aaagacggagcgtttgtggagctcttccatgagatcgacgaccggctcactgacctcggc
atttctagctacggcatctctgacacaaccctggaggagattttcctcaaagtggcagag
gacaatggtgttgatgctgagatgtcagatgggattatacccgcacgcaggaaccgcaga
catgcttttggtgaccatcagagctgcctgaagcctttcactgaagatgactttgatttc
aatgactctgaaggtgatccagaatctcgtgagacggactggctgggcggtgctgatggg
aaagggtcgtaccaggtgaagggctggagtctgaagagacagcagtttgtagccttgctc
tggaaacgcttcctgtatgccagacgttcccggaaaggtttctttgctcagattgtgctt
cccgctgtgttcgtgtgcatcgctctggtcttcagcctcattgtccctcctttcggaaag
tatcccagtcttgctctggagcccagcatgtatgaggagcagttctccttcatcagcaat
gacgcaccagaagacagacacacgaacaagttacttgaagctctgatggacaatcccact
tacaatgaacaatgtacagaccagaaaaacgctgctagcaaatcatgtccgattaaagat
ggagactggatggttccagagattcccaggaccattcaggacatcttcgtcaaagggaac
tggagtatggaaaacccatcgcctctgtgtgagtgcagctgtgaaggaagcaaaaagatg
cttcccgagtgtccgccaggcgcagggggtctgccgccgcctcagatcaaagtcaccatt
aatgaaaccctgcagaatctgaccggcagaaacatttcagactacttggtgaaaacatat
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcaggtatggt
ggattctcattgggtgctagaagctctcaggccctcccccctggcgatgagatcactgtt
gccatcgctcacattcgtaaccgtttcagtcttcaaacgggaaccgcggctgaccgcttt
ctgggaagcctgtcgactttcatccgaggtctcgataccaagaacaatgtgaagatctgg
ttcaataacaagggctggcacagtatgggagccttcctcaatgtcatgaacaatgccgtc
ctgcgtgctaatcttccccccggcctggatcagtccaaattcagcatcaaagcatttaac
catccgctcaacctcaccaaagagcagctctcacaggtggcgctaatgacgacctcagtc
gacgtgctggtgtccatctgcgtcatcttcgccatgtctttcgtaccggcaagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagcggagtg
cagcccttcctctactggctggccaactttgtgtgggacatgtgcaactacattgtccca
gcgaccctggtcatcatcatcttcgtctgtttccagcaagaggcctatgtgtcctccacc
aatcttcctgttctcgccctccttctgctgctctatgggtggtccataacacccctgatg
tacccagcatcattcttctttaagattcccagtacagcgtatgtggttttgaccagcgtt
aacatcctcattggaataaatggcagcgtatccacattcgtcctggagcttttcggcagc
aatgagattggcggcatcaacgacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggactcattgacatggtgaagaaccaagctatggctgacgctctggag
agattcggcgagaatcgcttccgctctcctctggcgtgggacatggtgggcaagaatctc
tttgccatggccatagaaggcgtgattttcttctgcatcaccgtccttatccagtaccgt
ttctgcatcaaggccaggtcggtcagcactaaactgaagccgattggagaggaggatgag
gatgtggccagagagaggcagaggatcttgtgcggaggaggacacactgatatcctggag
ctcaaacagcttaccaaggtttataagagaaagcagaagccagctgttgacagactgtgt
gtgggcatcccaccaggggagtgttttgggttgctcggtgtgaacggagctggaaagacg
agcaccttcaagatgctcacaggagattcggttgtcactagcggagaggcctacttggca
ggaaagagcgtgctgacggagatcgatgaagtgcatcagaacatgggctactgtccgcag
tttgatgccatcaacgacctgctgactggacgagaacatctggagttttacgccattctg
cggggcgtcccagagaaggaagtgtgcgaggtggcggattggggcattcgtaaactgggc
ctgatgaaatatgtagacaaagctgctggcagctacagcggaggaaacatgaggaagctc
tccaccgctatggctctcatcggaggaccgccagtggtgttcttagacgaacccaccact
gggatggaccccaaagcccggcgggccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtcgtcctgacctcacacagtatggaggagtgtgaggcgctctgcactcgc
atggccatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcacttaaagaac
aagttcggtgacgggtacaccatcatcctgcgggtgacgggggccgatccgcagctggag
ccggtgatggagttcatcgagcgggagctgccgggaagcacgctgaaggagaagcacagg
aacatgctgcagtaccagctgtcctcgtcgctgacatccctcgcccgcatcttcagcctc
ctctccaagaacaaagagcagctccacatcgaggactactccgtctcacagaccacttta
gatcaagtatttgtcaattttgccaaggaccaaagtgacgaggaccacttaaaagacatt
tccattaacaaaaacgatgcaatcgtggaaatgtctcatctgaatgccttcctcgtggac
gagaaggccaaagagactgtggtgtga
DBGET
integrated database retrieval system
