Carassius gibelio (silver crucian carp): 127949105
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Entry
127949105 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: tuberin
KO
K07207
tuberous sclerosis 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04115
p53 signaling pathway
cgib04140
Autophagy - animal
cgib04150
mTOR signaling pathway
cgib04218
Cellular senescence
cgib04910
Insulin signaling pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127949105
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127949105
09143 Cell growth and death
04115 p53 signaling pathway
127949105
04218 Cellular senescence
127949105
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
127949105
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127949105
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127949105
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127949105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
127949105
NCBI-ProteinID:
XP_052402004
LinkDB
All DBs
Position
B1:31473517..31512340
Genome browser
AA seq
1834 aa
AA seq
DB search
MNKQPSKESLRDRVKGIFGLGPTRPHSKQTESKPSEFIITLDIMMELSPEYGLHHRIRVI
NHVCELAKSKKFEEHAVEAVWKAVEDLMHPNQPPEARHAVLVLLRAIIQGQGERLGPLRA
YFFKIILDYQPSNEDLPERLEVFKALTENGKDITYLEEEIARFVLLWMDIGLSSDFLHVL
VNLVKFNSCYLDENVSLMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYSEDAALLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMNSANEVVSYEIVLSITRLIKKYGRELHVVTWDI
LLSIVERLLQQIQTMGSPDLKVIVYELLSTVEELYEQNDFHGSSERFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWLQNLLKLMEKFFRNESRTVIRIKVLHILSFVLSTNRQLY
EEELIEVVVIPQLGQIAEDRDLSVRKQATQLLVDLAEGCSTHHFSSLLDIIEKVAIRPLS
CSLEGERELSVESPMEDVRTAILGLLDILQSKLYSLPASHASRVYELLISHLQLHYKNRY
YSAAGSSIRLKVFDFLLMMRADSLHRLGVPNKDGVLRFSPYCHCDVGELEKRATDKKQAG
NVSSSPTGSPTPAAPPSSIRTAYLPYSLAFNVLLECLKMESDWKVLKLVLDKMSCTIQYK
VLVLTSSCNIDHLCSTLCSMVTDRLISERLKKTPDGFSLTDVQLAVVPVLTALTSYHSYL
EQPRQRELVQCLEKGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHISATVAMA
SPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAMWFIRC
RLAFRKDFVQYITKGLRSNALLPFDDTHEQSSFRARSTSLNERPKSLRTTKVAKQGPSAN
SPVKDLKDLSAMDAFRSRSISVSEHAVRRMQTSSTTCSLGSADENAVMQADDALKTVHLE
LTETCLDMMARYVFSNFSALPKRSPIAEFLLSGGPSMTWLVGNKLITITTSGGSRTQALL
GLDMAEKPGGGEMTRSDPSLHTRQTKEAPAKLESQSGQQISSSTRTRVRSISGGHALRAG
PAQSLSPLVASPEGEYSGPLPPPGPPLEVLGSQRGVDEHSASSASQSSAPLKDKSSLAEF
VPVLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNVPLQELSSVLMAMDGVKEPQS
EAPVPQPQGRPCPIQRSNTVGALGSLCSPETPGRLHRSISWADSVVLEEAGRSRATESRE
LEEFEGVASEPIFMSADTTPAGLLSRSSSTSSQDDEKSTLEEVSEGGIPIDQPPLGLSTP
GHQEADVSLSQATTLSKSSSSPELQTLPEAFTKAAVQSAADGDLLSSRIPTVQAGERETS
GESVTSAGPSSSSVSVSSSSTSRMRLEFPTSQPGPLSPAGHRXRGHTISVSAPSSRRERK
MDRDSYHNRGGASNAEKSSGLSPSFVFLQLYHSPFFGSEANKPLLLPKTQLIDRAVKVLD
QMPPYDTHKIGVVFVGAGQANNEVSILSNEYGSNRYAQFLTGLGKLIHLKDCDPDQIFLG
GLDQYGDDGEFTYCWHDDIMQAIFHIATLMPNRESDKGCCNKKRHIGNDFVVVVYNDSGE
EYKLGTIKGQFNFVEVLIKPLDYESNLVTLQCRKDLEGLVDTSVAKIVSDRNLPLLVRQM
ALHANMASLVHQCRANPSDAYASKWLARLRHIKRIRTRAQEEIQSRPTHAVSLTQSHAPM
QNKPAHQPPGSASNPDAGQRKRLVSTVDDFTDFV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacagcccagtaaagagtctctgcgggaccgggtcaaggggatctttggcctc
ggtccgactcggccccacagcaaacagactgagagcaaaccgtctgagttcatcatcacg
ctggacatcatgatggagctcagtccagagtacggcctccaccaccggatcagagtcatc
aaccacgtgtgtgaactcgccaaatccaagaagttcgaggagcatgcggtggaggccgtg
tggaaggccgtggaggacttgatgcatcctaaccagccgcctgaagcccgtcatgcagtg
ctggtgctgctcagagccattatacagggacagggcgagcgcttgggtccgctcagagcc
tacttcttcaagatcattctggactatcagccctctaatgaagacctgcccgagagactg
gaggtgttcaaggccctcaccgagaacgggaaagacatcacctacctagaggaggagatt
gctcggtttgttctgctgtggatggacatcggtctgtcatcagatttcctgcacgtcctc
gtgaacttggtcaaattcaactcctgctacctggatgagaacgtctccctcatggtccag
aaaatctgccttctctgtaaccggacgacttcctccacggacattgaggttgcactgcag
gtgttggacgcggtggtgtgttataactgcctgccgtctgactctctgacggtgttcatc
atcactctgtgccgaacggttaacgtgaaggagttctgtgaatcctgctggaagttgatg
cgtaaagtgctgggaactcacctgggtcacagtgccatatacaccatgtgccgaatcatg
gaggagagggtgtacagtgaggacgccgctcttctcaggggtgctgtgttttttgttggg
atggcgctgtggggagctcacagacttcctgccctcaagaacacgcccactctggtcctg
ccctccttctacaaggccatgaacagcgcgaatgaggtggtgtcctacgagatcgtgctg
tcgatcacacggctcatcaagaagtacggccgagagctgcacgtggtgacgtgggacatc
ctgctgtccatcgtagagagactcctgcagcagatacagacgatgggcagccctgatctg
aaggtgattgtttatgagttactgagcaccgtggaggagctgtacgagcagaacgacttc
cacggatcctcggagagattcttcagcctggtggagaagtgtgctgataaacgccccgat
gcgtctgtgctgacgctgatctcctacagagctcagtccatccagccggctaaagacggg
tggctgcagaacctgctcaaactcatggagaagttcttcaggaatgagagccgtactgtg
atcaggatcaaggtcctgcacatcctgtccttcgtgctcagcacaaaccgccagctctat
gaggaggagctgatcgaggtggtggtgattcctcagctgggtcagatcgctgaagatcga
gatctgtccgtcaggaaacaggccacacagctgctggtggatctggccgagggctgcagc
acgcatcacttcagcagcctgctcgacatcatcgagaaggttgctattcgtccgttatcg
tgctctctggagggagagagagagctgtctgtggagtctcccatggaggacgtccgcacc
gctatcctgggtctgctggacatcctacagagtaaactctacagtctgccggccagtcac
gccagccgcgtgtacgagctgctgatctctcatctgcagcttcactacaagaacagatac
tacagtgctgccgggagctccatacgcctcaaggtgtttgatttcttactgatgatgagg
gccgactctcttcaccgtctgggtgtccccaataaagatggcgtcctgagattcagccca
tactgtcactgtgacgtcggggagttggagaagagagctaccgacaaaaagcaagcagga
aatgtgtcgtcgtctccaacaggaagtccaacaccagcggctccgccctcctccattcgc
acggcctatctgccctacagcctggccttcaatgtgctgctagagtgcctcaagatggag
tcggactggaaggtgctgaagctggttctggataagatgtcctgcaccatccagtacaag
gtcctggtcctgacctcatcctgcaacatcgatcacctgtgttccactctctgctccatg
gtgaccgaccgtctgatatcggagcgactgaagaagactcctgatggtttctccctcact
gatgttcagctcgctgtggttcctgttctcaccgccctcacctcgtaccacagctacctc
gagcagccccgacagagggagctggtgcagtgtttggagaaggggctgatctaccgctgt
gctaagcagtgtgtggtggctctgaccatgtgcaccgtagagatgcccgacatcatgatc
aaactcctgcctgccctcatcgtcaagctcacgcacatctccgccaccgtggccatggcc
tcgcccatgctggagttcctgtccacattagtgcggctccctcatctgtatgctaacttt
gtagccgagcagtacgtcagcgtgtttgccatatcgctgccctacaccaacccctcaaag
tttaatcagtacatagtgtctctcgcccatcatgtgatcgccatgtggttcatacgctgc
agactggctttcaggaaagacttcgttcagtacatcaccaagggtctccgctcaaatgct
ctcctgccgttcgatgacactcacgagcagagcagcttcagagcgcgcagcaccagcttg
aacgagaggcccaagagtttgcggacgaccaaagtggcgaagcaaggccccagcgcaaac
tctcccgttaaagacctgaaagatctgtcggccatggacgccttccgctcccgaagcatc
agtgtgtccgagcatgcggtgcgcaggatgcagacgtccagcaccacctgcagcctgggc
tcggctgacgagaacgcagtgatgcaggcggacgacgcgctgaagacggtccatctggag
ctgacggagacctgtctggacatgatggctcgatacgtcttctccaacttctctgcgctg
cccaagaggtctcccatcgcagagttcctgttgtccggtggccccagtatgacttggctg
gttgggaataagttgatcaccattacgaccagcggtggctctcgaacccaagcccttctg
ggtctggacatggcagagaagcccggaggaggagaaatgaccaggtctgacccgtcctta
cacacccgacagacgaaagaggctcctgccaaactggagtcacagtcgggtcagcagatc
agcagcagcactcgcacccgcgtccgctccatatcaggtggtcacgctctgcgggccggg
ccggctcagagtctcagtcctctggtggcgtctcctgagggggagtacagcggccctctg
cccccgccgggacccccgctggaggtgctggggtcccagagaggagtggacgagcactcg
gcgtcctccgcatcacagtcctcagcgccgctcaaagacaagtccagcctggccgagttt
gtgcccgtgctgacgcagggctgggccgagatcttcatccgcagaccctcagggaacacc
agctggctgatgtgtctggagaacccgccgagccccttctcgtctgagctggggaacgtc
ccgctgcaggagctgtccagtgtgctgatggccatggacggggtgaaggagccccagagc
gaggcccctgtgccccagccgcagggcaggccctgtcccatccagcgctccaacaccgtg
ggtgctctgggctctctctgctcccctgaaacacccggcaggttacacaggagtatatcg
tgggcagattcggttgtgttggaagaagctggacggagcagagcgaccgagtccagagag
ctggaggagtttgagggcgtagcgtctgaacccatcttcatgagcgcagatacaacccca
gccggcttactgagcagatcatcctccacctcgagtcaggacgatgagaagtcgactctg
gaggaggtgagtgagggcggtatccccatcgatcagcctccgctgggtctctccacaccg
ggacatcaggaggcagacgtctcattatctcaggccaccaccctgagcaagtccagctcg
tccccggagctgcagactctccccgaggccttcaccaaagctgcggtccagagcgccgcg
gacggagacctgctgagctcccggatccccacggtccaggccggcgagagagagacctcg
ggagagagtgtaacatcggccggcccgtccagctccagcgtctccgtctcctcgtcctcc
acctccaggatgaggctggagtttcccacatctcagccaggacccctgtctcccgccgga
cacagantccgaggacacaccatctccgtgtccgcaccctcgtcccgcagggagaggaag
atggaccgagactcgtaccacaaccgaggaggagcatccaacgcagagaagagctcagga
ctcagtcccagcttcgtcttcctgcagctctatcactctccgttctttgggagtgaagcc
aacaaacccctcctgctgcccaaaactcagctgatcgatcgagccgttaaggtcctggac
cagatgcctccgtacgacactcataagatcggcgtggtgtttgtaggagccgggcaggcc
aataacgaggtgtccatcctgtccaacgagtacggctccaaccgctacgctcagttcctc
accggcctgggaaagctcatccacctgaaggactgcgaccccgaccagatcttcctggga
ggactggatcagtacggagacgacggagagttcacctactgctggcacgatgacatcatg
caagcgatctttcacatagccacactgatgccgaaccgcgagagcgacaagggctgctgc
aataagaaacgccacatcgggaacgacttcgtggtggtggtgtacaatgactccggagag
gagtacaaactcggcaccatcaagggtcagttcaacttcgtggaggtgcttataaagcct
ctggactacgagagtaacctggtgacgctgcagtgccggaaagatctggagggtttggtg
gacaccagtgtggcgaagatcgtttctgaccgcaatctaccgctgctcgtgagacagatg
gcactccacgccaacatggcatcgctggtgcatcagtgcagagccaacccatcagacgcc
tacgcttcgaaatggttggccagattgagacacatcaagaggatcaggacacgggctcag
gaggaaattcagtcacgccccactcacgcagtctctctgacccaaagccacgcccccatg
cagaataaacccgcccaccagccccccggctctgcttcgaacccagacgccggccagagg
aagaggctggtgtccaccgtcgacgatttcacagactttgtctag
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integrated database retrieval system