Carassius gibelio (silver crucian carp): 127949205
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Entry
127949205 CDS
T08819
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127949205
03036 Chromosome and associated proteins [BR:
cgib03036
]
127949205
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
127949205
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
127949205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
127949205
NCBI-ProteinID:
XP_052402184
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All DBs
Position
B1:complement(25420634..25431992)
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AA seq
702 aa
AA seq
DB search
MNDTLEFSEIYQEVKGTWNDGRLRFSKQTVVYKNSKTGKVDSIPVSELTQAQWRRVCLGH
GIKLWTSTGNIYKYDGFKDTDLEKISEYFKANYKVELVEKDMCVKGWNWGTAKFNGPLLS
FEVNESPAFEIPLNSVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGEEGADPVE
AFAQNILSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMNEDEVERRFE
GKLHKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEGNDSDDSEGESDES
FNPGEEDDEIAEEYDSKASASESSADDGDSDGDRKKKPAKKAKFVKERKPRKKEKKAKDS
SAPKRPMSAYMLWLNSSRDRIKSENPGISITEISKKAGEMWKQLGKEKKEEWDAKAVEAK
KEYDRAMREYKESGGGSSGSSKKEKKKKGGKNEEKRKRKSAGGREKEKERATGNDSFKSR
EFISSEESSSESDKGKGRKRKGSDDEEEVVSTPPSSEESGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacactctggaattcagtgagatttatcaggaggtcaagggcacctggaacgat
gggcgtcttcgcttcagtaaacagacagtggtgtataaaaacagtaagactgggaaggtg
gacagcattccagtgtctgagctgactcaagcccagtggaggagagtgtgtctgggtcac
ggcatcaagctgtggaccagcaccggcaacatttacaaatatgatggcttcaaagacact
gaccttgaaaagatctcagagtacttcaaagccaactacaaggtggagctggttgagaaa
gatatgtgtgtgaagggctggaattggggcactgctaaatttaatggaccgctgctttca
tttgaggtgaatgagagtccagcgtttgagattccgctcaacagtgtgtcccagtgtgcc
acgggaaagaacgaggtcactgtggagtttcatcagaatgatgacacagaggtatccctg
atggaggtgcgcttctatgtcccacccaccacaggagaggagggtgcagaccctgtggag
gcttttgctcagaacattctgtcaaaggcagatgtcatccaggctacaggagatgctgtg
tgtatcttcagagagttgcagtgcctcacaccaaggggcaggtatgatatccgcatttat
ccgacattcctccatctgcatggtaagacatttgactacaagatcccatacaccacagtg
ctccgccttttcctgttacctcataaggatcagcgccaaatgttctttgtgatcagtctg
gacccgcctattaaacaaggtcaaacccgctatcattttctcattcttctgttttctaag
gaggaggatatcagccttactctcaacatgaatgaggatgaggttgagagacgttttgag
gggaaacttcataaaaacatgtctggctctctctatgagatggtcagcagagtcatgaag
gccctggtcaacagaaagatcacagtgcctggaaatttccaaggtcactcaggtgctcag
tgtataacatgttcatacaaggccagttcagggctgttgtatcctctggaaagaggtttc
atctatgtgcacaagcccccagtgcacctgcgcttcgaggagatcgcctgtgtgaacttc
gctcgtggaaccaccaccacccgctcctttgatttcgagatcgagaccaagcagggaaat
caatacaccttcagcagcatcgagagggaggaatatgggaaactctttgacttcgtcaat
gctaagaagttaagcatcaagaacagaggcttcaaagagggcatgaaaggtaatgataac
atgtacagtgactcagacgacgaccagcacgatgcgtacctggagcgcatgaaagaagag
ggcaagatccgtgaggagggcaatgacagtgacgactcagagggcgagagtgatgagtct
tttaatcctggagaagaagacgatgaaattgcagaggagtatgacagtaaggcctctgcc
agtgaaagcagcgctgatgacggagacagtgatggcgatcggaagaagaaaccagccaag
aaagcgaaatttgtaaaagaaagaaaaccacggaagaaagagaaaaaggcaaaggacagc
agcgcccccaagaggccaatgagtgcctacatgctctggctgaactcaagcagagatcgc
attaaatcagagaacccaggcatctctatcacagaaatctccaaaaaggctggagagatg
tggaaacaacttggcaaagagaagaaagaggagtgggatgcgaaagcagtggaagcaaag
aaagagtatgatagagcgatgcgagagtacaaggagagtggaggaggctcctcgggcagc
tcaaaaaaggagaaaaagaagaaaggagggaagaatgaagaaaaaaggaaaaggaagtca
gctggtggaagggaaaaagagaaggagcgagctacaggcaacgacagcttcaagagtcga
gagttcatatccagtgaggagagctcatcagagtcagacaaaggcaagggacggaagcgc
aaggggtctgatgatgaagaggaagtggtcagcacaccgcctagctctgaagagtctggc
tcagactaa
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