Carassius gibelio (silver crucian carp): 127949207
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Entry
127949207 CDS
T08819
Name
(RefSeq) glycine receptor subunit alpha-3 isoform X1
KO
K05195
glycine receptor alpha-3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127949207
04082 Neuroactive ligand signaling
127949207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127949207
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glycine
127949207
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
127949207
NCBI-ProteinID:
XP_052402186
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All DBs
Position
B1:complement(23410861..23458714)
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AA seq
488 aa
AA seq
DB search
MTRKRLRSVAVWGFVAWQIGIMSSLVASKKTENPQGEKASSPSDFLDKLMGRTSGYDARI
RPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPS
MLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMD
VQTCIMQLESFGYTMNDLIFEWQEKGPVQFAEGLTLPQFILKDDSDLRYCTKHYNTGKFT
CIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSS
GSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKKSGKTF
DQTFDEELTESFHHINGLHSAEPVYGSMGQLDESNEGEEEVRESRLSFTPNAGKDGAVPK
AANNTATTPSDPALTAGKSHEEMRKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVLYKIL
RHEDVHKP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaaaaggctgcgttctgtggctgtctggggattcgttgcatggcaaatagga
attatgtcgagtttggtagcatcaaaaaaaacagaaaaccctcaaggagaaaaagcatca
tcaccctctgacttccttgacaagctcatgggaagaacctcaggttacgatgccagaatt
aggcccaactttaaaggtccgcccgtgaatgtatcatgcaacatattcattaacagtttt
ggctccattgcagagacaactatggattacagagtgaacatatttctccggcagcaatgg
aacgaccctcggctagcttacagcgagtacccagatgactccctggacctggatccctcg
atgttagactccatttggaagcctgatctgttcttcgccaatgagaagggagcgcacttc
cacgaggtcaccactgacaacaagctcttgagaattttcaagaatggaaatgtcctctat
tcaatcagactgactctgacactctcgtgtccgatggatctgaagaatttccccatggat
gtgcagacgtgcataatgcagctggagagttttggttacacaatgaatgacctgatcttt
gagtggcaagagaagggacctgtacagtttgccgaaggtttgacactcccacagttcatc
ctcaaggatgattctgatttgagatactgcaccaagcactacaacacaggcaagttcaca
tgtatcgaggtacgttttcacctggaaagacagatgggctactacctgatccagatgtac
attcccagcctgctcatcgtcatcctgtcctgggtctccttctggatcaacatggatgct
gctcctgcccgtgttgccctgggaatcaccacagtgctcacaatgacaactcagagctct
ggatccaggacgtctttacctaaggtgtcttacgtgaaggcaattgacatctggatggct
gtgtgcttgttatttgtcttttctgcgctgttggagtatgctgcggtcaactttgtttca
cggcaacacaaagagctcttacgattccgacggaaaaggaagaagtctgggaagactttc
gatcaaacttttgatgaggagcttaccgagtcattccatcatatcaatggcctacacagt
gctgagccagtttatggatcaatgggccaactcgacgaatccaatgaaggggaggaggaa
gtgcgggagagccggttgagcttcacgcccaatgcagggaaagacggagccgtgcccaaa
gctgctaataatacggccacaacaccctctgacccagccctcactgccggcaagagtcat
gaggagatgagaaaactcttcatcgaccgagccaagaagatcgacactgtgtcccgtgcc
ggattcccactggcctttctttttttcaatattttctattgggtcctttacaaaatccta
cgtcacgaggacgtgcacaagccatag
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