Carassius gibelio (silver crucian carp): 127949309
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Entry
127949309 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127949309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127949309
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127949309
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127949309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
WWE_5
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
PHD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127949309
NCBI-ProteinID:
XP_052402368
LinkDB
All DBs
Position
B1:complement(27020813..27038653)
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AA seq
726 aa
AA seq
DB search
MDTMLLASAVVVWEWLNEHGRWRPYSPAVSHHIEEVIRSDPRGGSVVLGRADSRLSPYII
DLHSMHQFRQDTGTLRPVRRSFYDPTSAPGQGWIWEWENDAGSWTTYDMEVIIALQVAWD
RQQPWLDLTSMGFCYFVDFQTMTQINRQTQRQRRIQRRPDMVYPLVSGPLPKTSQAWGTG
SGSGGIAQGLASGGGSTGALLGVGVSGSTLSRKGSAVYPSGTLSISSLAPSGQPCACQQC
MLVLSVKANGTSSQTLGRSTKPNSPKSNFGTLPSSSESMSVLNSYSTLPHGTSLKCSEVA
KKSAGFDQSLSLLTSGTANLSVSSSRPPPPTLPSPNQQPSSAPSSSSSATFVPTAMLINT
STSPSSSTDLTSSSSSLPSQRSAACAAPLPTRASLTGLSRPALQRIAVAQSQALIASGVP
TVPVTLNLNGSSPVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDITPIPGIG
KCCRKSTKKQARKGRTPEEVVKRYFQKVRNPPEEDCTICMEALGGPSGYKGPGVASVLRA
ESVGRLAQCGHLYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHS
LPGHPDCKTIRIIYNIPPGIQGPEHPNPEKPFTARGFPRHCYLPDSEKGRKALRLLLVAW
DRRLIFSVGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDSAYIDNLLDELKAQGITE
DEEQLL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgttgctggcctccgccgtggtcgtctgggaatggctgaacgagcacggg
cgctggcggccgtacagcccggccgtgtctcaccacatcgaggaggtgataagaagcgat
ccccgcggcggcagcgtcgttttaggccgagctgacagccgcctgtcgccctacatcatc
gatctgcactccatgcatcagttcagacaggacaccggtacattaagaccagttcgacgg
agtttctatgaccctacctcagcaccaggccaaggttggatatgggagtgggaaaatgac
gcaggttcctggacgacctatgacatggaggtgatcattgccttgcaagtggcatgggat
cgacagcaaccctggctggacctgacatcgatgggcttttgctactttgtggacttccag
accatgacccagattaacaggcaaacacagcggcagcggcgcatccagagacgcccagac
atggtttacccactagtctctgggccactgcctaaaacctcacaggcttggggtacaggc
tcagggtctggaggcattgctcaaggacttgcttcaggtgggggctcaaccggggcactt
cttggggtaggtgtttctggatctaccttgagtagaaaaggaagtgcggtttacccaagc
gggacgctttcgatatcatcccttgctccttctggacagccatgtgcctgccagcagtgc
atgctagtgttgagtgtaaaggcaaatggcacctcatcacagacactgggacgttcaaca
aagccaaacagtcctaaatccaactttgggacccttccatcctcctctgagtccatgtct
gttttaaactcctattctacactaccacatggcacgtctttaaaatgctcggaagtagcc
aagaaatctgctggttttgatcagtcattgtctcttctcacatcgggcacggccaatctc
tcagtctcctccagccgcccaccgcctccaactctgccatcgccgaatcagcagccttca
tccgctccaagctcttcgtcttctgcaacatttgtgccaaccgccatgcttattaacaca
tcaaccagtccatcatcatccacagatttgacatcatcttcatcatcgttgccttctcaa
cgctctgctgcctgtgctgcccctctgccaactcgtgccagtctgacagggctcagtcgt
cctgctttgcagagaattgcagtggcacaatcacaggcccttattgcttctggggtaccg
acagtaccggtgactcttaatcttaatggctccagccctgtccatccggctttagctggt
attacaggtattctgatgagtgcagcaggactacctgtatgtttgacccgtccaccaaaa
ctagttctccacccccctcctgtcagcaagagtgacataacaccaatccctggcattggg
aagtgttgccgcaagtccaccaagaaacaagcacgcaaaggcagaacacctgaggaagtg
gtaaaaaggtactttcagaaggtcaggaatccaccagaagaagattgtactatctgtatg
gaggctctagggggtccctctgggtataagggtcctggtgtagcaagtgttttgcgtgca
gagtcggttggaagactggcacaatgtgggcatctttatcacctgcagtgcctagtggcc
atgtacaacaatggcaacaaagatggcagcctgcagtgtcccacgtgcaagacaatatat
ggagtaaagacaggcaaccagccgcccggtaagatggagtaccatgtcatcccgcactca
cttccaggacacccagactgcaaaaccattcgcatcatctacaacataccgcccgggata
cagggtcctgagcatccaaatccagagaagccttttacggcaagaggatttccccgtcac
tgctatcttccagacagtgaaaaaggacgcaaggcattaaggctgttattggtggcgtgg
gatcgacggctgatcttctcagtgggcacctccagcaccacaggagagtcagacactgtc
atctggaacgagatccatcacaagacagaatttggctccaatcttactggacatggctat
ccagattctgcctatattgacaatttactagacgagcttaaagcccagggcatcactgaa
gatgaggaacagctactgtga
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