Carassius gibelio (silver crucian carp): 127949342
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Entry
127949342 CDS
T08819
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127949342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127949342
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127949342
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
127949342
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
127949342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
zf-CCHC_2
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
127949342
NCBI-ProteinID:
XP_052402403
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Position
B1:complement(13439251..13488714)
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AA seq
576 aa
AA seq
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MFSGYQERDDYEDELYRDDADSSLSDNDSELEFQLYSQLHYSTEIQEDREDSREVQSSVP
QTQTQQKPLPHAPPVDVIVIDSGTDAITESDSSEEDDSVCAKMGQSSKRWNKKLQTHSLL
SPSLPQVQARSSSPDDEVVLESDSEDSSSESVPPFVEDLDSDSDGLENWMILGRDKQDGD
QNIQLNLSLPEHANDEENELFWAVSVKDKEAQISNKRFGPRRVSNRYYNEKSITCHNCKK
SGHLSKNCPAPKKMPCCSLCGLQGHFRRNCPNRYCSNCSLPGHTSDNCLERAYWHKRCHR
CDMTGHFFDACPEIWRQYHITTTKGRICQASDPEASRKPAYCYNCSKKGHFGHECTEKRM
YNGTYPTLPFISRYDTMNDTYYREIRVQKQARELEQAGLISPDRAVVTYTPQPPRKKQKT
SHKQSPYPYNTHSNNQSTPKRRIAHTPKHTNFSVKQNSETSWSHGRQTPKSKFKPQEPSQ
NKAKKKKKKTQSKGIVLDEDADFPRGYNKSKTRDVSSPRKANVKPNKPFGMEKNSKKDKI
SKKKERKWQKRERKAAKDSSMYPSDENLFLIKQRKV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagggtatcaggagcgggatgactacgaggacgagttgtaccgggatgatgcg
gactcgagtttgtctgacaacgacagtgaactggagttccagctttattcccagctgcac
tacagcactgagatccaggaggaccgtgaggactcgagagaggtccagtcatcagtacca
cagactcaaacacagcagaaacccttgcctcatgctccacctgtagatgttattgtgatt
gactctggcacagatgctatcacagagtcagacagctctgaggaagatgacagtgtatgt
gctaaaatgggtcaatcatcaaaacgctggaacaagaagttgcagacccatagcttgctt
tcaccctccctaccacaagttcaagcaagaagtagctccccagatgatgaagttgtgttg
gaatctgattcagaagacagctcttctgaatctgtacctccttttgtggaggatctggat
tcggactcggatgggctggagaactggatgattctgggccgggacaaacaggatggagat
cagaacatccagctcaacctctccttaccagaacatgcaaatgatgaagagaatgaactg
ttctgggctgtatcagtaaaggataaagaggctcagatctctaataaaaggtttggcccg
aggcgtgtttcaaaccgttactacaatgaaaaatccatcacgtgtcacaactgcaaaaag
tccggccatctctccaaaaactgccctgcaccaaagaagatgccatgctgctcattatgt
gggcttcagggacactttcggaggaactgtccgaaccgttactgttctaactgctcgctg
cccggccacaccagtgacaactgtctggagagagcttactggcacaaacgctgccaccgc
tgtgacatgaccggacacttctttgacgcttgcccagaaatctggagacagtatcacatt
acgaccactaagggacgcatctgtcaagccagtgatccagaggcctccaggaaacctgcc
tactgttataactgctctaagaaaggacacttcggccatgaatgcaccgagaagagaatg
tataacgggacatatcccaccctgccgtttatttcccgttacgacacgatgaatgacacc
tattaccgggaaatccgagttcaaaagcaggccagagaactcgagcaagccggattgatt
tcaccggacagagctgtcgttacatacaccccccaaccgcccaggaagaaacaaaaaacc
agccacaaacagtctccatacccatacaacacacacagcaacaaccagtccacgccgaag
agacgcatcgcacacacacccaaacacactaacttcagtgtcaagcagaactcggaaacg
tcatggagccacggcagacaaacccctaagagcaagtttaaaccacaagagccaagccag
aataaagccaaaaagaagaaaaagaaaactcaatcgaaaggtattgttttagatgaagat
gcagactttcctagaggttataacaagagtaaaacaagggatgtttcatcacctcggaaa
gccaatgtgaagccgaataagccctttggaatggaaaagaacagtaaaaaggacaaaata
tcgaaaaagaaggagaggaaatggcaaaagagagaacgaaaagctgcaaaagattcttcc
atgtatccttccgatgaaaacctttttctgattaagcaaagaaaggtatga
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