Carassius gibelio (silver crucian carp): 127949366
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Entry
127949366 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127949366
00071 Fatty acid degradation
127949366
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127949366
09143 Cell growth and death
04216 Ferroptosis
127949366
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127949366
03320 PPAR signaling pathway
127949366
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
127949366
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127949366
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127949366
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127949366
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
127949366
Exosomal proteins of breast cancer cells
127949366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127949366
NCBI-ProteinID:
XP_052402439
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All DBs
Position
B1:complement(11506114..11531751)
Genome browser
AA seq
697 aa
AA seq
DB search
MQAQDLIRHLRIPELDDLRQYVRSLPTNTLMGMGVFAAITTYWLATRPKALKPPCDLAMQ
SVEVQGSGYARRSILQDSDTYMTYYYKDAQTMYEFFLRGLRVSNNGPCLGSRKPGKPYKW
LSYKEVADRAEFAGSALLHRGHSQTGDKYIGIFAQNRPEWTISELACYTYSLVAVPLYDT
LGTEAISYIIDKATISTVICDIADKARLILDCVSGRKHSITTIVVMENYDSELTEQAQQK
GIEILSLEELEAIGKVNYKTPIPPKSEDLALICFTSGTTGSPKGAMITHGNVVSNCSAFI
KVTAVHCMLNQTDIHISYLPLAHMFERVVEGVLLVHGARIGYFQGDIRLLMDDLKTLKPT
IFPVVPRLLNRMFDKIFGQANTPLKRWLLDFATSRKEAELKSGVVRKDSMWDKLIFSKVQ
ASLGGRVRLMITGSAPVSPTVLTFLRAALGCQFYEGFGQTECTAGCTMSLPGDWTAGHVG
APLPCNFVKLVDVAEMNYFAANGEGEVCVKGSNVFQGYLKDPERTSEAIDKDGWLHTGDV
GKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIRSDPVAQVFVHGDSLQACLVGIV
VPDPDSLPGWAKKRGIEGSYIEMCKSKELKNAILEDMIRLGKEAGLKSFEQVRDIVLHME
MFSVQNGLLTPTLKAKRAELRNHFRQQIDQLYAKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggatctgatccggcacctgcggatacctgagctggacgatttgaggcag
tatgtgcgcagtttacccaccaacaccctcatgggcatgggcgttttcgctgccatcacc
acatactggctggccacccgtcccaaagcacttaaaccaccctgtgacctcgccatgcag
tccgtggaggtacaggggagtggatatgctcgtcggtctattctacaggacagtgacaca
tacatgacatactactacaaagacgctcagacgatgtatgaatttttcttacgaggacta
cgagtgtcaaataatggtccttgtttgggatctcgtaaaccgggcaagccatataaatgg
ctttcatataaagaggtagcagacagggcagagttcgcaggttcagcattactccacaga
ggtcacagtcaaacaggagacaaatacattggcatctttgcccagaacaggccagagtgg
acgatttcagagctggcatgttacacatattcactggtggcagtgccactgtatgacaca
cttggtacagaggccatcagctatatcattgacaaagccaccatctccactgtgatctgt
gacatcgcggataaggctcgtctgatcctggactgtgtgtctggccggaaacacagcatc
acaaccatagtggtcatggaaaactatgacagtgaactgacagaacaagcacaacagaaa
ggcattgagatcctgagcctcgaggagcttgaggctattggcaaagtgaactacaagaca
cccattccccctaaatcagaggaccttgcactgatttgcttcacaagtggaactacagga
agtccaaagggagcaatgatcacacatggaaacgttgtttccaattgttctgctttcatt
aaagttacagcggttcactgcatgctcaaccagacagacattcacatttcttacctgcca
ctagcacacatgtttgagagagtggtcgagggtgtgcttctggtccacggggccaggatt
ggatattttcagggtgatatccgtctgttgatggatgatttgaagactcttaagcccact
atattccctgtagtgcccagactactcaaccgcatgttcgataagatcttcggacaggcg
aacactcctcttaaaagatggcttctggattttgccaccagcaggaaagaggcggagctt
aaaagtggagttgtcaggaaggatagcatgtgggacaaactgatcttcagcaaagtgcag
gccagtctgggtggacgtgtgaggcttatgatcacaggatccgctccggtctctcccacc
gtcctcaccttcctgcgagcagcgctgggctgccagttttatgagggttttgggcagaca
gagtgtactgcaggctgcactatgtcacttcctggagattggacagcaggtcatgtggga
gcaccactgccctgtaacttcgtcaagcttgtggatgtggctgagatgaattattttgca
gcaaatggagagggagaggtgtgtgtgaaaggatcaaatgtgtttcaaggttacctgaag
gacccagagcgaacctcagaagccatagataaagacggctggctgcacactggagatgtt
ggcaaatggcttccgaatgggactctgaagattatagacaggaagaaacacatctttaag
ctggctcagggtgaatacatcgctccagagaagattgagaacatctacatccgcagtgac
cctgtggctcaggtctttgtacatggagacagtctgcaggcttgtttagtgggaattgtg
gttcctgatccagattctctgcccggatgggcaaagaaaagaggcattgagggctcctat
attgaaatgtgcaaaagcaaggaactcaaaaatgccatcctggaagatatgattcggcta
gggaaagaagctggactgaagtcctttgaacaggtgagagacattgtcctgcacatggaa
atgttctctgttcagaatggacttctcacaccaacactgaaagcaaagagagccgagctg
agaaaccacttcagacagcagattgaccagctctatgctaaaatcaaaatgtga
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