Carassius gibelio (silver crucian carp): 127949417
Help
Entry
127949417 CDS
T08819
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127949417
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127949417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
SAM_KSR1
LRR_4
Motif
Other DBs
NCBI-GeneID:
127949417
NCBI-ProteinID:
XP_052402614
LinkDB
All DBs
Position
B1:complement(34459629..34466024)
Genome browser
AA seq
885 aa
AA seq
DB search
MKIKYERLFEGMKLQENETPLNRIYTQLFIIEGESEGVNEEHEVLQMEKTARTQHSQDTP
IDCNDIFKASAEAGSEQKDQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVL
PFRELNLIQDHQYSLHRLLLDFHPELQDLDSQIYEECKVVFIFDGLDESRITLMFSDAQK
VCDVTETSSVAVLMSKLMKGELLPSALIWITSRPAAANQIPSKYIHRLTEIQGFTEPQKE
EYFRKRISDEHQASRIISHIRRSRSLHIMCHIPIFCWISSTVLQKLLEEDLRAEIPQTLT
EMFIHFLLIQINMRKQKYEERDPEKLLQSNREVIVKLAEVAFKQLMKGNVMFYEEDLIES
GIDVTDASVYSGICTEIFNVESVIHQSKVYNFIHLSVQEFLAAFHVFYYYVSTTMEGLRN
FASLQNLLKCAVDKALESENGHLDLFLRFLLGVSLESNQRLLQDLLTHTENSSESIRRTT
QYIKEMIKDGHELSTERSINLFLCLLEVKDQTLSREIQEFVKSDKHSEKKLSPAHCSTIT
YMLQMSEEQLDELVPMKYNTSDEGRRRLIPAVRNCRKALIAGCNVTAQDCEIVSSALQSS
NCVLRELDLSNNDLQDSGVKLLSEALKSTNCQLEILRLSGCMVTEEGCGYLSSALSSNPS
HLKELDLSYNHPGPSGVQLLKHKLEDPNSSLQMLNFDHGNPLRIIPGLRKYACDLTLDPN
TAHTQLVLSEGNRKAKHVQDHQQYPVHEERFEQHEQVLSQDSLTGRCYWEVEWSGWAYIA
VTYKGINRKGGSESWFGYNDKSWSLYCTENRYSAWHDNKKTDIPAPSSSNRVGVYVDESA
GTLSYFSVSDTHTLTHLHTFNTTFTEPLYAGFRVFKSSLSLCQFK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaagtatgagagattatttgagggaatgaaactccaggagaatgaaaccccc
ttgaacaggatctacacacagctcttcatcatagagggagagagtgaaggagtaaatgaa
gaacatgaggttttacagatggagaaaacagccagaacacaacactcacaagacactcca
atcgactgcaatgacatctttaaagcctccgctgaagcaggatctgagcagaaagatcag
atcaagactgttcttactaaaggcatcgctggaatcggaaaaaccgtctctgtgcagaag
ttcatcctggactgggccgagggaaaagccaatcaggatgtagatttcatgtttgtgctt
ccatttcgagagctgaacttgatccaagatcatcagtacagtcttcacagacttctgctg
gactttcatcctgaacttcaagatctggactcacagatttatgaggagtgtaaagttgtg
ttcatctttgatggtctggatgaaagcagaattacactgatgttttcagacgctcagaaa
gtttgtgatgtgactgagacttcatcagtggctgtgttgatgtcaaagctcatgaaagga
gagctgcttccctctgctctcatctggatcacctccagaccagcagcagccaatcagatc
ccctccaaatacatccaccgtctgacagaaattcagggattcactgagcctcagaaggag
gaatatttcaggaagagaatcagtgatgagcatcaagccagcagaatcatctcacacatc
agaaggtcaagaagcctccacatcatgtgccacatccccatcttctgctggatctcatcc
actgtgcttcagaagctcctggaagaagatctgagagcagaaatccctcaaactctgact
gaaatgttcatccacttcctgctgattcagatcaacatgaggaagcagaagtatgaagag
agagatccagagaaactcctgcagtccaacagagaagtgattgtgaaacttgctgaagtg
gctttcaaacagctgatgaagggtaatgtgatgttctatgaggaggacctgattgagagc
ggcatagacgtcactgatgcctcagtgtattctgggatttgcactgagatctttaatgtg
gaatctgtgattcatcagagtaaagtctacaacttcattcatctgagcgttcaggagttt
ctcgctgctttccatgtgttttactattatgtgagtacaactatggaaggattgaggaat
tttgcttcattacaaaatttgcttaaatgtgcagtagataaagctctagagagtgagaat
ggacatctggatctgttcctgcggttcctgctgggcgtctcactggagtcaaatcagaga
ctcttacaggatctactgacacacacagagaacagctcagagagcatcaggagaaccaca
cagtacattaaagagatgattaaagatggacatgaactctccactgaaagatccatcaat
ctgttcctctgtctgctggaagtgaaagatcagactctgtccagagagattcaggagttt
gtgaaatcagacaaacactcagagaagaaactctctcctgctcactgctcaacaatcacc
tacatgcttcagatgtcagaggagcaactagatgagcttgttccaatgaaatacaacaca
tcagacgaagggagaagaagactgataccagctgtgagaaactgcaggaaagctcttatt
gctggctgtaacgtgactgctcaggattgtgaaattgtatcatcagcactccaatcctca
aactgtgtcctgagagagctggatctgagcaacaatgacctgcaggactcaggagtgaag
ctgctctctgaggcactgaagagtacaaactgtcagctggagatactgaggttgtctggc
tgtatggtgacagaggaaggctgtggttatttgtcttcagctctgagttcaaacccctca
catctgaaagagctggatctgagctataatcacccaggaccatcaggagtccagctactc
aaacacaaactagaggatccaaactcctcactgcagatgctcaattttgaccatggaaac
cctttgagaatcatcccgggactgagaaaatatgcctgtgatctcacactggatccaaac
acagcacacactcaactcgtcctgtctgaagggaacagaaaggcaaaacacgtccaagat
catcagcagtatcctgttcatgaagagagatttgagcagcatgagcaggttctgagtcaa
gacagtttgactggacgctgttactgggaggttgaatggagcggatgggcttatatagca
gtaacatataaaggaatcaacaggaaaggaggaagtgaatcttggtttggatacaatgac
aaatcctggagtctgtactgcactgaaaacagatattctgcctggcatgataataagaaa
actgatataccagccccttcatcctctaatagagtaggagtgtatgtggatgagtcggct
ggcactctgtcatacttcagcgtctctgacacacacacacttacacacttacacacattc
aacaccacattcaccgaacctctgtatgctgggttcagggtgtttaaatcctcattgtct
ctgtgtcagtttaaataa
DBGET
integrated database retrieval system