Carassius gibelio (silver crucian carp): 127949641
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Entry
127949641 CDS
T08819
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127949641
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127949641
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
127949641
NCBI-ProteinID:
XP_052403038
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All DBs
Position
B1:17930121..17937493
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AA seq
843 aa
AA seq
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MGLKDHLDDGTGHILELGLDLDYLDVKATDQHTGADAGLIMDSGLSDMGDIVPPCTRSCG
SSPQDNSEESAASDSEPAHSHSHPLVDMLGEGSIHSVHPPHSKSPCLDMDSLVVDIVHQE
PGPVNTLREYQTKMEFALKLGYAEDLVRLVLNKLGSDALINDVLGELVKLGSKPENEGGT
QNLSQSTSTSSSSSSSGTSFDSFSDLLDSRQSESPFVEDKDNFRPIVIDGSNVAMSHGNK
EMFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFTP
SRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYSFVND
KFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQPQRA
VADELRASAKNSTVKSVGETGLVKSHSEPGGFHNDKACDGKRSLPKRQLDPSIRAHSYSD
VEDKLCSKTKADLYKSNLALPPAPGGPPSCHGYSHDLKDHKQIQAEPHANCESPDLYYSM
VRAYSGLSLPSQNSPDRHFLSDADPRTSSVASDCSSDGSMSSDSYGMATHNEHSCMSSSD
LLLDEGIKCPHHQHHRRNYQLPSVIPPGFILSPATSNHPGFHHSIPHVHSFAPEDQQDPH
FHHSVSYSKHQVIGSRSSYPGDYPPLFQNNTHSQNSPLGRGLASTLVDSMSDSYEHSPLL
PKKPYVSQERKTSWGTYYRQHSQQCYEPIGFQGLSKNREQMWRMPWGCPSAPPPHHLPHA
LSHQHQEPLALSRYQEAREKVFTNLCNIFPTELVQLVMGRYPHVTDAQQLAAAILAEKNY
AGY
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaagaccatctggatgatggaacaggccacatcctcgaactggggctggat
ctagactaccttgatgtcaaggctacagaccagcacactggcgcagacgctggacttatc
atggacagtggtttatctgacatgggtgacattgtgcccccctgcactagaagctgcggt
tcttctccacaagataactcagaggaaagtgcagcgtcagacagtgagcctgcacatagc
cacagtcatcctcttgttgatatgcttggtgaagggtccatccattcagtccacccacca
cactctaagtctccatgtctggatatggattcactagttgtggatatagtacaccaagag
ccaggccctgtgaatacactcagggaataccagacaaagatggagtttgcccttaaactt
ggctatgcagaagacttagttcggctggttctaaacaagctcgggtcagatgcactgatc
aatgatgttcttggggagctggtaaaactgggcagtaagccagagaatgagggtgggaca
cagaatctctcccaatccacttccacatcatcatcatcatcatcctctggcacatctttc
gacagtttctctgacttacttgactctcgccagtcagagtctccctttgtggaagataag
gataacttccgcccgattgttattgatggcagcaatgtggccatgagccatggcaataag
gagatgttctcctgtcaaggcattcagctcgcagttgactggtttcttgaacgtggccat
cgagacataaccgtttttgttccggcctggaggaaagaacagtcccgtcccgatgctctt
atcacagatcaggagattttgagacgtctggaaaaggataagattcttgtatttacacca
tcacgtcgtgtccagggccgcagagtagtctgctatgatgacaggtttattgttaagcta
gcttatgaatcagatggcattattgtctccaatgacaactacagagacttggctgttgag
aaaccggaatggaaaaaatttattgatgaacgccttctgatgtactcctttgtaaatgat
aagtttatgcctcctgatgatcctttgggtcgacatgggccaagtctggagaattttctt
agaaaaagacccatcattccagagcataagaaacagccctgtccatatggaaagaaatgt
acctacgggcataagtgtaagttttaccatccagagcgtggtacacagccacagcgagcg
gtagcagatgagctccgtgccagtgccaagaactccacagttaaaagtgtgggagagaca
ggtctcgtgaaaagccacagtgagcctggaggcttccataatgataaagcttgtgacggt
aaacgatctctgccaaagaggcaactggaccccagtatccgtgcccactcttacagtgat
gtggaagataaactgtgctccaaaactaaagcagacctgtataagagcaacctagctctt
cctccagctccaggaggtcctccttcctgtcatgggtatagccacgacctgaaagatcac
aagcagattcaagcagaaccacacgcaaactgtgaatctcccgatctgtattactccatg
gttagggcatattctggtctaagcctgccctctcagaacagtccagatcgtcacttcctg
tctgatgctgatccacggacaagctcagtggcatcagattgcagcagtgatggcagcatg
agctccgattcttatggcatggcaacccacaatgagcattcttgcatgagttcttctgat
ttgctactggatgaaggaatcaagtgtcctcaccaccaacatcatcgtagaaattatcag
ttaccctctgttattcctccagggttcattctctctcctgctacatctaatcacccagga
ttccaccacagtatacctcatgttcatagttttgctccagaagaccagcaagacccccat
ttccaccactctgtctcctacagcaagcatcaagtgataggctcccgctcaagctatcct
ggagactatcctcctctcttccagaacaacactcactcccagaactctcctctgggtcgt
ggccttgcttcaacacttgtggacagcatgtcagactcttatgaacactctccactgctt
cctaaaaaaccctatgtatcccaagagcgaaagaccagctggggtacatattacagacag
cactcacaacaatgctacgagcccatcggtttccagggtctttcaaagaatcgtgaacag
atgtggaggatgccctggggctgtccttctgctcctccaccccaccatctgccccatgct
ttatcacaccagcaccaggagccacttgccttgagtcgttaccaggaagcacgagagaaa
gtgtttaccaacctgtgcaacatttttcccacagagctagtgcagttggtcatggggcgg
taccctcatgtgactgacgcccaacagctggcagcagccattttggcagaaaagaactat
gctggatactaa
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