Carassius gibelio (silver crucian carp): 127949689
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Entry
127949689 CDS
T08819
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127949689
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Others
Others
127949689
Endosome - Golgi transport
127949689
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
127949689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
127949689
NCBI-ProteinID:
XP_052403111
LinkDB
All DBs
Position
B1:complement(14935276..15170777)
Genome browser
AA seq
2879 aa
AA seq
DB search
MASAGDSAVGIPVRGIRMKFAVLAGLLEAGEVSNRDTVETIFNLLVGGQFDLEMNFIIQE
TESIFCMVELLDKCDSTCQAEVWSMFTAVLKKSLRNLQACTEIGLIQLVLPRIDRAETMI
ADLMVDMLGVLASYSITVKELKLFFSKLKAEQGQWPPHAVKLLSVLKCMAQRNGPDSFFS
FPGKSAAAIALPPIAKWPYQNGFTFHTWLRLDPINNINVDKDKPYLYCFRTSKGLGYSAH
FVGGCLIVTSLKSKAKGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSEISCYVNGELASYG
EITWLVNTSDTFDKCFLGSSETADANRVFCGQMGTVYLFSEALSAAQILAIYQLGSGYKG
TFKHKAESDLLFAEHHKMLLYDGKLSASIAFTYNPRATDAQLCLESSPKDNASIFVHSPH
ALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDFLQHSGDELDTSVCCTLLSFVMEL
LKGSVAMQEQVLACKGFLVIGYALEKSSKVHVTRPVLDIVLAFARYLSNLPTGVLLLKQL
CDHILFNPTIWIHAPAKVQLILYTYLATEFISTVTIYNAIRRVGTVLQIMHTLKYFYWVV
NPLDRSGITPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDHSVKEDELQSILNYLLTMH
EDDNLMDVLQLLVALMSEHPGSMVQAFDQRNGIRVIFKLLASKSEGIRVQALKVLGYFLK
YLSPKAKSEVMLAHGLFSLLTERLMLHSNQFTVTTYNVLFEILTEQICTQVIHKQHPDPD
SSVKIQNPQILKLIAALLKNASPGAESMEVRRIFLSDMIKLFNNSRENRRSILQCSVWQE
WMLSLCFINPKNSEEQKISEMVYAIFRILLYHAVKYEWGGWRVWVDTLSITHSKVTFEQH
KENLAHMFLEYQRMGSEGGSESRIRTVSGTSHDSQFLASASSDLNADETAPSTVIELRVD
EKVTDQPGDNEETRDQIPVTVSNILARDEEERQTDTVATSPETNKGDKGEQVTTKEPGKD
NEVQNIEVDIDGDHERVERVEADITMTEGSVNEKESADLSVIDDADNTQTATDKDANVEA
EAVKIPAEDDGQTSTADTVLNVQVGDKEKGPGDSSPEVVKEARVEETSEASANQETSETG
ASIKNEDSTDVSSANNLVKVSDDSTEETSFVSATAGETDDNSAEKEDDGKEKDKKLETEK
DEKPLQNEKIEETKDEPAHVVEVDLNRSTSIDETKLHTETTAGHGAVETEQTPEVLSPDL
SKVSTAEVSPCTESMSQDPGTNQDILKAAGTETSATKTKEIKIARLDVSSVASDTERLEL
KDTSTTNLSANPAASSSPSGQDNEGSSSARSTMFRIPEFKWSYMHQRLLTDLLFSIETDV
QMWRSHSTKTVMDFVNSSENVVFVHNTVHLVSQVVDNLIMACGGILPLLSAATSSTHELE
NIEPSQGLSVEASLMFLQRLISLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAM
AVRNCLECQQHTLGKSCAESSRGQQSLVGAAKSIPAQSPVDIVTGGMSPIRDLDRLLQDM
DINRLRAVVFRDIDDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKSHAQRSQSVRST
ESVQSDLENGLSPHRRDSSIEDGKTSVITEAQTGPDAVSEALSTLSSEVRRGQDVTDRDS
KGKNVNVKDILRSLVSAPSDDIIVDPSLIPPGFLGAVGDASRDQSVQFHSFDRSVVVAPK
RMGGAPSPGMSTVSAAAAVPSATAASLGGTPVNSVSVVSAGETVESTESIPGGTSTSSNL
PSVPALSPVTQSSAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIE
GTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVAN
EAEFILSRQRAEDIHKHAEFESQCAQYAAEKRDEEKMCDHLIRAAKYRDHVTSTQLIQKI
VNILTDKHGAWGCSAFSRPREFWRLDYWEDDLRRRRRFIRNLFGSTHSEATLKAAAEHAP
DEDVLKGKQSIRGSVLGKQNSESELLLEDDDTLSSLEEKDLENLTGPVNLSTSAQLVAPA
VVVKGTLSITALELYFEVDEEDPSFKNIDPKILAYTEGLHGKWQFTEIRAVFSRRYLLQN
TALEVFMANRTAVMFNFPDAATVKKVVHCLPRVGVGTNFGLPQTRRISLASPKQLYKASN
MTQRWQRREVSNFEYLMFLNTISGRTHNDLNQYPVFPWVITNYDSEDLDLTMPSNYRDLS
KPVGALNPKRAAFFSERFESWEDEQVPKFHYGTHYSTSSFTQMWLLRIEPFTTFFLNFQG
GKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDDGTVVSD
VELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAIRALNVFYYLTYE
GAVNLSSISDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPLMFTEQMQ
QDVIMVLKFPSNSPVTHVAANTQSGLTNPAIITVTANRLFAVNKWHGLTGHQSSSVQDQQ
YQLPVEIDPLIANNVGIHRRQISDLLDQSIQVNAQCFVITADNRFILLCGFWDKSFRIYS
TDTGKLTQIVFGHLDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGENPGT
EFVTPRAILTGHDCEVTCASVCAELGLVISGCREGPCLVHSMNGDLLRTLEGPDGCVRPR
LVLSSTEGHCVIYYDKGRFCVFSINGKLLGHMEVEDNIKAMLLSKDGQYLLSGGDAGVLS
VWQIHDLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8640 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcaggggacagcgctgtcgggatccccgtccgaggaatccgcatgaagttc
gccgtgctggcggggctcctggaggctggtgaagtctccaatcgggacactgtggagacg
atcttcaatctgctggtcggcggacagttcgatctggaaatgaactttatcatccaggag
acggagagcatcttctgcatggtagagctgctggataaatgtgattccacttgccaagct
gaagtgtggagtatgttcaccgccgtgctgaagaagagcttgcgaaacctgcaggcctgc
acagaaatcggcctcatccagctggtgcttccacgcatagaccgggccgagaccatgatc
gcagatctgatggtggacatgctaggagtgctggccagctacagtatcacagtgaaggaa
ctgaagctgttcttcagtaaactgaaagcagaacaaggccaatggcctcctcatgccgtc
aagttgctgtccgtgttgaagtgcatggctcaaagaaatggcccagattcctttttcagc
ttcccagggaagagtgctgcggctattgcacttccacctattgcaaaatggccatatcag
aatggctttaccttccacacctggcttcgcctggaccccatcaataacataaacgttgac
aaggacaagccttatctctactgctttcgcaccagcaaaggtttgggctattctgcacac
tttgtgggcggatgtctgattgtgacctctctaaagtccaaagccaaaggcttccagcac
tgtgtgaaatatgactttaaaccccagaagtggtatatggtgaccatagtgcacatctat
aatcgctggaagaacagtgaaatcagctgctatgtcaatggagagttggcgtcatatggt
gagatcacctggcttgtcaacacaagcgatacattcgacaagtgttttctgggctcatca
gagacagcagacgctaaccgtgtgttctgtggtcagatggggacagtttatctgttcagt
gaggctctcagcgctgctcagatattagccatctatcagttggggtctggatacaagggc
acttttaagcacaaggcagagagtgacctgctgtttgcagaacatcataagatgctgctg
tatgatggaaagctgtctgccagtatcgccttcacctataatccccgagccactgatgct
cagctgtgtctggaatcctcccccaaggacaacgcttccatctttgtgcactcaccacat
gctctcatgctgcaggacgtcaaagctgtggtcacacactcagttcagagtgccatccat
tctattggaggagttcaggtccttttccccctgtttgcacagctggatttcctccagcac
agcggtgacgagctggacacctccgtctgttgcacactactgtcatttgtgatggagctg
ttgaagggctctgtagctatgcaagagcaggtgctggcctgcaagggctttcttgtcatc
ggttacgcactggagaagtcttccaaagtacacgtgacacgacctgtgctggacattgtc
cttgccttcgcccgttatcttagcaaccttcccactggagttttgctcttgaaacagctg
tgtgaccacatcctcttcaaccctaccatctggattcatgccccagctaaggtacagctg
attctctacacttacctggccacagaattcatcagcactgtcaccatctacaatgccatc
cgcagagttggaactgtactgcagatcatgcacacactcaaatatttctactgggttgta
aacccactggaccgcagcggaatcacacccaagggtcttgatgggccaagacccaatcaa
aaggagattcactctctccgagcattcctgctgctgtttgtcaagcaacttatcatgaag
gatcacagcgtgaaggaagacgaactgcagagtattctgaactacctgctcacaatgcac
gaggatgataatctgatggacgttcttcagcttctggtggcactgatgtctgagcaccct
ggatcaatggttcaagccttcgatcagcgaaatggaatacgggtcatctttaagctgctc
gcatccaaaagtgaagggatccgtgtgcaggcactcaaagtcttgggctactttctcaaa
tatttgtcaccgaaggcgaagtcagaggtcatgctggctcacggcctgttctctctgctc
actgaacgattgatgctccactcaaaccagttcacagtcacaacatacaacgtgctcttt
gagattcttacggagcagatctgtactcaggtcattcacaaacagcatccagaccccgac
tcctctgtgaagattcaaaacccacagatcctaaaattgatagctgctctattaaagaac
gcttctccaggagccgaaagcatggaagtacggcgtatcttcctctcggatatgattaaa
ctcttcaacaacagcagagagaaccgcaggagtattttgcagtgctcggtgtggcaggag
tggatgctgtctttgtgctttataaaccccaagaacagcgaggagcagaagatctcagag
atggtgtacgccatatttcgcatccttctttatcatgctgttaaatatgagtggggtggc
tggcgcgtgtgggtggacacactgtccattacgcattccaaggtcacctttgagcaacac
aaagagaatctggcccacatgttccttgagtaccagcggatgggttctgagggaggatct
gaaagcagaatcagaactgtatctggaaccagtcatgattctcagttccttgcctcagcc
agtagtgatctgaatgctgacgagactgctccatctacagtaattgagctacgtgttgat
gagaaggttactgatcagcctggagacaatgaggaaaccagggaccagatcccagtcaca
gtgtccaacattctggccagagatgaggaagagagacagacagacactgtcgctacctca
ccagagacaaataaaggggataaaggtgaacaggtcactacaaaagaaccaggaaaggat
aatgaagtgcaaaatatagaggttgacattgatggagaccatgagagagtggaaagagtt
gaggctgacatcacaatgactgaagggagtgtaaacgaaaaagaaagtgctgatctgagt
gtaatagatgatgcagacaatactcagactgcaaccgacaaggatgccaatgtggaagct
gaagctgtgaagataccagctgaagatgatggtcaaacaagcactgctgatactgtacta
aatgttcaagtaggagataaagaaaagggacctggagattcttctcctgaagttgtgaag
gaagccagagtggaagaaacttctgaggcttcagcaaaccaggagaccagcgaaactggg
gcctccatcaagaatgaagatagcactgatgtttcctcagccaacaacttagtgaaggtc
agtgatgacagcacggaggagacttcttttgtttcagctacagcgggtgagactgatgac
aatagtgctgaaaaggaagatgatgggaaggagaaagacaagaagctggaaaccgaaaaa
gatgagaagccgttacaaaatgagaaaatagaggaaaccaaggatgaaccagctcacgtg
gtggaggtggatttaaaccgaagcacctctatcgatgagaccaagcttcacacagagact
acagctggtcatggtgctgttgagaccgagcaaactccagaagtgctttctccagatttg
tccaaggtgtctacggcagaggttagcccttgcactgagagtatgtcacaggatccagga
actaaccaagacattctgaaggcagcggggactgagacctcagcaactaaaaccaaagag
attaaaattgctagactggatgtgtcaagtgtggcctcagacacagagagattggagcta
aaggacacctcaacaacaaatctgagtgcaaatccagcagcttcttcaagcccctcaggt
caggacaatgagggctcgtcttcggcacggtccactatgttccgtattccagagttcaag
tggtcttatatgcaccagcgccttttgactgacctgctgttctctattgagaccgatgtg
cagatgtggagaagtcattcgactaagacagttatggactttgtgaacagcagtgagaac
gtagtgtttgtgcacaacactgtccatctagtctctcaggtggtggacaacctcatcatg
gcctgtggaggaatccttcctctgctgtctgcagccacctcttctacgcatgagctggag
aacattgagccgtctcagggtttgtctgtggaggcgtcactgatgttcttgcagaggctg
atcagtctcgtggatgttctgatcttcgccagttcactcaacttcacagaaatcgaagca
gagaagaacatgtcctctggaggaatcctaagacaatgcctacgtttggtgtgcgcgatg
gctgtgagaaactgtctggaatgtcagcagcacactctgggtaagtcttgtgcagagagc
agccgtggacagcaaagccttgtgggagccgccaagtctataccagcacagagtcctgtg
gacattgtgacaggagggatgtctcctatcagagatttagaccggcttctgcaggacatg
gacatcaaccgtctccgtgctgtagtgttcagggatatagatgacagtaaacaggctcag
ttcctggccctggctgtggtctactttatctctgtactcatggtatctaaatatcgagac
atccttgagccacacaatgacaaaagtcatgcccagcgctcacagtctgtcaggagcaca
gagagtgttcagtctgatcttgagaacggtttgtctccccatcgtcgggactctagtatt
gaggacgggaagacctcagtcatcaccgaggcacagaccggcccagatgctgtatccgaa
gccctgtctactttgtcctctgaagtcaggagaggtcaagatgtcactgatagagacagc
aaaggcaaaaatgttaatgtcaaggatattttgagaagtctcgttagtgctccctctgat
gacatcatagtggaccctagcctcataccgcctgggtttctgggtgcagtgggcgatgct
tcccgtgatcagtccgtccagttccactcttttgacaggagtgttgtcgtggcacccaag
agaatgggtggggctccctcaccaggaatgagtacggtctctgcagctgcagccgtccca
tcagccactgctgcatccttgggtggaactccagtcaacagtgtgtcagtggtgtccgca
ggagaaactgttgagagcacagagtctatcccaggaggaacctccaccagctccaacctg
ccatctgtccctgctttatccccagtgacccagagctccgcccccaacatgagtatctca
gagaggttggaacatgctctggagaaggcagctcctttactccgagagatttttgtggat
ttcgcaccattcctctctcgcacattgctgggcagtcatggacaggagctactcatcgag
ggcaccagtcttgtgtgtatgaaatctagcagttctgtggttgaactggtcatgctgctg
tgttctcaggagtggcagaattccatccagaagaacgcgggcttggccttcatcgagctt
gtgaacgagggcagactgctgagccacaccatgaaggaccatctggtgcgtgtcgctaat
gaggccgagttcattctgagccgccagagagcagaggacatccacaaacacgcagagttt
gagtctcagtgtgctcagtatgccgctgagaaacgtgatgaagagaagatgtgcgatcac
ctgatcagggccgccaagtaccgggatcacgtcacatccacccagctcatccagaagatt
gtaaacatcctcacagataagcacggtgcctggggctgctctgcgttcagcagaccgcgg
gagttctggcgcctggactactgggaggatgacctgaggagacgccgacgcttcatcagg
aacctgtttgggtccacacactctgaggccacgctcaaggctgcagcagagcatgctcca
gatgaggacgtgctgaaaggcaaacagtccatcaggggttcagtgctggggaagcagaac
tcggagagcgagctgctcttggaggacgatgacactctctcatccttggaggagaaagat
ttggagaacctcacagggcctgttaacctgagcaccagcgcacagctggttgcgcccgct
gtggtggtaaaaggcacactgtctatcacggccctggagttatactttgaggtggatgaa
gaagacccgagttttaagaacattgatcccaagattttggcctacacagagggtctgcat
gggaaatggcagttcacagagataagagcagttttttcacgccgctatctgctccagaat
acagcgctggaggtcttcatggccaacagaacggcagtcatgttcaacttcccagatgca
gccacagtgaaaaaggtggtgcactgtctccccagagttggagtcggcacaaatttcggc
cttcctcagaccagacggatttctctggccagtccaaaacagctttacaaggcctccaac
atgacccagcgctggcaaagacgagaggtctccaactttgagtacctcatgttcctcaac
accatatctggccgtacacataacgatctgaaccagtatcctgtgttcccctgggtaatc
accaactacgacagtgaagatctcgacctcactatgcccagcaactacagagatctatcc
aagcctgttggtgcactcaacccaaagagggctgcattcttctcggaacgttttgaatca
tgggaggacgagcaggtgcccaaattccactacggcacacactattccacctccagcttt
actcagatgtggctactcaggattgagcctttcacgacgttcttcctgaatttccaaggt
gggaaatttgaccatgcagatcgcactttctcttcagtgtccagagcctggagaaactgc
cagagggacacgtctgacgtgaaggagttgatccctgagttctattacctcccagagatg
tttgtcaactccaataattacaacctgggagtgatggatgatgggacggtggtgtcagat
gtggagctgccgccctgggccaagagtcctgaggagttcgtacgcatcaaccgactcgct
ctggagagtgagtttgtgtcctgtcagctgcatcagtggattgatttgatatttggatac
aagcagcagggacctgaggccatcagagctctcaatgtcttctactacctgacttatgaa
ggagcagtcaacctcagctccatatcggaccccatgctccgagaggctgtagagtctcaa
atcagaagttttggacagacaccctgccagctgctaattgagccccaccctccacgcagt
tctgccatgcaggtgtatctccttctgcagaccccactgatgttcacagagcagatgcag
caggacgtcatcatggtactcaagttcccgtccaactcacctgtcacacacgtggccgcc
aacacacagtcaggcctaaccaacccagcgatcatcacagtcaccgccaaccgcctcttc
gctgtcaacaagtggcacggcctcactggtcatcaaagctcttctgtgcaggaccagcag
taccagttaccagttgagattgaccctttgatagccaataatgtgggcatccacagaagg
cagatctcagatctgttagatcagagcatccaggtaaatgctcagtgttttgtcatcacg
gctgacaaccgcttcatcctgctgtgtggattctgggacaagagcttccgcatctactcc
actgatacaggtaaactgacacagattgtgtttggccatcttgatgtggtgacctgtctg
gcccgctcagagtcatacattggtggagactgttacgttctgtccggctccagagacgcc
acactactgctctggtactggaacggcaagcacagcagcatcggagagaaccctggaact
gaatttgtgactccccgggcgattctgacgggtcatgattgtgaagtcacgtgtgcaagt
gtgtgtgcagagctgggactggtcatcagtggctgcagagagggtccatgtcttgtccac
tcgatgaacggagacctgttgaggactctggagggtccagacggctgtgtgcgaccgcgc
ttggttctgtcctccaccgagggtcactgtgtcatttattatgacaagggccgcttctgt
gtgttcagcatcaatggaaaactgttgggacatatggaggtggaagacaacatcaaggcg
atgctgctaagtaaagatggccagtatctgttgtctggaggagatgcaggagttctcagc
gtgtggcagatccatgatctcaaacagctcttcacttacccaggatgtgatgctgggata
cgctccatggctatgtcacatgaccaaagatgcatcatcactggaatggcgtctggtagc
attgttctgttctacaatgacttcaacagatggcaccatgaataccagacgagatactga
DBGET
integrated database retrieval system
