Carassius gibelio (silver crucian carp): 127949721
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Entry
127949721 CDS
T08819
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04217
Necroptosis
cgib04620
Toll-like receptor signaling pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127949721
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127949721
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127949721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127949721
04090 CD molecules [BR:
cgib04090
]
127949721
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127949721
CD molecules [BR:
cgib04090
]
Proteins
127949721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
LRR_9
TIR_2
TIR
LRR_6
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127949721
NCBI-ProteinID:
XP_052403168
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All DBs
Position
B1:11723089..11727954
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AA seq
904 aa
AA seq
DB search
MERMKLILLPLFCMCFHGHCAGTAYPHKSKCTIGNNKADCSHMNLDAVPTDLPKNITTLD
VSHNRLKNLSSLHLYSNLMNIDASYNTLKIIEEDLCISLPHLQSLNMQHNEVHLLNEKDL
KNCSHLTRLDLSYNRLKLIGEPFSVLKSLTWLDVSWNTLKSAKLGTQPQLPNLVTLALSG
NEISELQKNDFSFLSNSSVFRVLILSSLSLKKVENGCFQTIARLTDLVLDYSKISLQLTP
SLCEELAGTALRSLSLKNTQQVTLSNTTFQGLDKTNITVLDLSSNTMTKIANGTFQWFPR
LESLSLGHNSLKHLTKDTFLGLGNLRQLNLQKALIKSHSSSLPIIEDFSFSHLVQLEHLC
MTDTAFREITEHIFSGLLNLKTLDLSWSITGLKTVTNTTFASLQESAHLQTLNLTATGIN
KLAPGAFSNLGNLSTLLLSHNFINQQLKGHELEGLSNIKELDMSENQQSISLTNTSFIHV
PTLRTLKLGRAVKGTLDIEPSPFRPLVNLTILDLNNNNIANINAGLLKGLYNLKVLKMQH
NNLARLWKTANPGGPVLFLKDATKLSALDLDYNGLDEIPLNALHGFFELRELSLRGNLLD
QLHASVFDDLQSLKYLHLQKNLITSVLRVTFGVPLSNLTELYMDHNPFDCTCESILWFSE
WLNSTNVSVPGFPQSYICNTPNAYFNRSVMDFDPLSCKDMTPFKALYIMSSTAVLMLLFT
AFLLHFQGWRIQFFWSIMVNRMLGSLKDERITEGRYAYDAYIIHSAEDRPWVERSLLPLE
DEKLIFFLEDRDAVPGVSQLDAIVENMGRSRKIIFVITEMLLKDPWCRQFKAHHAHHQVM
EDNRDSLILIFLQDVTDYNLNRSLYLRRGMLKPHCVLNWPLHRERIPAFHEKLRSALAST
NRVN
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgaaactcatattgttgcccttgttctgcatgtgtttccatggccactgt
gcaggcacagcatacccacacaagtcaaaatgtacaattgggaataacaaagcagactgc
agtcatatgaatctggatgcagttccaacggacttacccaaaaatatcaccacattggat
gtgtcacacaacagattaaaaaatctgtcttctctgcatttgtattcaaatctgatgaat
atagatgccagctacaacactttaaagatcatagaagaggatctatgtatttctctgcca
cacctgcaaagtcttaatatgcaacacaatgaagtgcatttattaaacgagaaagacctg
aaaaactgttctcatttaacacgacttgacctgtcttacaataggctgaagctaattggg
gagcccttctctgttcttaagagtttgacgtggttagatgtatcctggaacacacttaaa
tcggctaaattgggaacacaacctcaactgccaaacctggtgacccttgctctatctgga
aatgaaatttctgaactgcaaaaaaacgacttttcattcctcagcaattcctctgtattt
cgggttctgatactctcatccctgtctcttaaaaaggtagagaatggctgtttccagact
attgctagacttactgacttagtgctggactacagcaagatcagccttcagttaaccccc
agtctttgtgaagaacttgcaggcacagctttgcgaagcctttcccttaagaacactcaa
caggtcaccctctcaaacacaactttccaaggtctagacaagactaacatcacagtgctc
gacctcagcagcaacacgatgacaaagattgctaatggcacctttcagtggtttcccaga
ctggaaagtttatccctggggcataactcccttaaacacctaactaaggacaccttcctt
ggattgggaaacctgagacagcttaacctgcagaaagcactgattaagagtcatagttca
tccctaccaattattgaagacttctctttctcccatttagtccaattagagcatctatgc
atgacagatactgcatttcgagagataactgaacatatcttttctgggcttctgaacctg
aagacactggatttgagttggagcatcacagggttgaagacagtcacaaacacaacattt
gcttctttgcaagaatctgcacaccttcagactcttaatcttactgccacgggtatcaac
aagttggcacctggggccttttcaaatttgggcaacctctcgacactcctactcagtcac
aatttcattaatcagcagctgaaaggacatgagttagagggcctttcaaacattaaagag
cttgacatgtctgaaaaccagcaaagtatttcccttaccaatacctcattcatccatgtc
cctacattaaggactctaaaacttggccgtgcagtaaaagggaccctagatatagaacca
tctccgtttaggccacttgtcaacctcacaattctagatctcaataacaacaatattgca
aacataaatgctggcttgctgaaaggactgtacaatttgaaggtactgaaaatgcagcac
aacaacttggctaggttgtggaagacggccaatcctggtggtccagtgttgttcctcaag
gatgccacaaaactgtctgctctggatctggattacaatggtttagatgagattccactt
aatgctttgcatggcttctttgagttacgtgagctaagtctccgtggtaatttattggat
cagctgcatgcctctgtttttgatgacctacagtctttaaagtatttgcatcttcaaaag
aaccttataacatccgttctacgtgtcacgtttggtgtgccactttccaacctgacagaa
ctctacatggaccacaacccctttgattgcacctgcgagagcattctgtggttctctgag
tggcttaactccaccaatgtcagtgttcctgggttccctcaaagttatatatgtaacacc
ccaaatgcctactttaaccgctctgttatggactttgacccattgtcctgcaaggatatg
acaccttttaaagccctgtacattatgagtagcacagcagtgttaatgttgttattcaca
gctttcctgctacacttccaaggatggagaatccagttcttctggagcataatggtgaac
cgtatgctggggtcactgaaggatgaaagaattactgagggtagatatgcatatgatgca
tatatcatccacagtgctgaagataggccatgggtggaacgaagcttgcttcccctagag
gatgaaaaattaattttttttcttgaagacagagatgcagtacctggcgtttctcaactt
gacgccattgttgaaaacatgggacgttccaggaaaataatttttgttattacagaaatg
cttctgaaggatccttggtgtaggcaattcaaagcccatcatgcacatcaccaggtaatg
gaggacaatcgtgactcactgattctgatttttttgcaagatgtaactgattacaattta
aaccgctctctgtatcttcgtcgtggcatgttgaaacctcactgtgtactaaactggcct
ttacacagggaacgaatcccagctttccatgagaaactccgctcagcactagcttctacc
aacagagtcaactag
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