Carassius gibelio (silver crucian carp): 127950413
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Entry
127950413 CDS
T08819
Name
(RefSeq) uncharacterized protein LOC127950413 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127950413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127950413
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127950413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
127950413
NCBI-ProteinID:
XP_052403400
LinkDB
All DBs
Position
B2:13246671..13325066
Genome browser
AA seq
2657 aa
AA seq
DB search
MEEAGDANGTGTQGCEPERSGDGGLDEVQMHLACLPERYMRAKFSLSAYIFCWTVVKLCQ
RLRPSPVLPQAPALEDSGSEAACLDDGESPREEHGEQQDHQEWCEPVSEAAQDIKEEYFD
THSLYSDTFSGLSHETEDCCRTPLNSVGHLDLHSSSVRRRDPSSSNQADSLSRTEDREQL
QKQTENMGIMYMGVDGTGMSEAKGAPECEEVFGNFPAGPGVDSSSRNDQSYIVTPLLALE
NAVEPQALTEPCANDSLLTLTDCDGAKSQFADTFEGRSKWDQINKNITDTQSGHNEPRIQ
FITSSEKKLQKNDIDSSNTEVQLISNASIANLSVYESVSVEKPIEQEFEESTKPSQPQPS
VEHSQSQPSLDHSTSQPSVEHSQSQPSVEHSQSQPSLDHRTSQPSVEHSQSQPPIEHSKS
QASTEHNQTQDSVECSQSRNSAEHSQSQSPTVDRPSQGFFEHSQSQNSVEHRQLLDSIEH
SQSQDSVECRQSQNLVENSQSQDSVEHSQLKDFVECSQSLYSVEHRQSQSSEDMPSQNFI
KQSQSQTPVEHTKSQDSVKCSQSQNSVEPNQSQDSVEHSQSQSSVEDMLSQNVINNNNKS
QDPLASLQFTQSQDSVELSPSNDSVECIQSQDSLENSQSHTTSELTQLQYSIECSQSQNS
IQNRKSQDLTEQNQLQNTIVYSQSQTPVEHGQSKTPLEHSQSQASVEHSHSQTSVEHSQS
QLDSIKANSMNTRWTVTEYDSGLISNTAALYEKGQLEQDCVDACINCEVSQSLKTSGRLS
LYDSDRELDLNFEKNNSPNFKKQNLNDIPPVVSECESFAAERAFSNVPNTTSAGVSDSLN
QHVINDRTSEQSDLQTRPHYGQHNFPVLQMHTEKKDYSDSSYHMDSHCLEDIVSEEHEPE
ADFYETSIINFNTQSKFTEAQVYVKSKTFETNDGDILEGTMKNSKTRHIIKGYQKECTIV
PSIEQSVIYSDSSGCIEYTRPKSPSVVCPDIKTAESEGCPVDSPVESLASLFEISDDKSQ
VSPTDVCLGLSDGLHMNCKQVAHRVIEYKETSKQPDTLSDKQARQNKSVETIEPVLDILS
SACTDPFTNTQSPFDYSQLNSRNNEYSSDTNNNIKAIHFEECASGEQISLPNSLQKYSRF
SINAGSLVSKGGDRKDNALPFQATPFKVPEMKSAIDRKDNVARPSAFNEFSSHRDPILKQ
LCDCCGGKECQLHSSAVEGDQTAGGFQFKGTDGISQSRSAVLQTSSPSHTDDKCNTHGEV
NADSTNCEFSHIGHLLAHKHPEPVQEKNILPLSGSLKVDDTYSSENMERKLETFTASSPE
STDSTRETSDPLCKRSLQLCNAEIEGAFVTCCRILPITNLEAILESDRSPESSFVIENGL
GEQQEASPSSEGGFSEEWGSCDDITNRPHANISAMCTKANIATVMNEQYAGETISSLSNG
FDSSDGNSVSSFVSQDLDSSTNSEETEDSTQSTSSLRSSARNKRTQSGKGSVFSVFSRMP
SFRKIKREHKANSKVDQEIKETNEEGDEQGEFKRLPTHNNSIPSLYKTSISQSTDHLTDI
TEFVDNSNDDIFEKAFALNMQNRDKQTQSQKLYQQHKDGDALNFRVSAMPEGLQQKRSKS
TDNLNLRMKLAMAHKSLSSLFESRYPERDNQEQIAQPENEEVKTKQSWRKSKRSKEAELF
KRTLSVPGMVCDRSIHQSHVDCAFCAPQNRSRLNSSPASQKSLRNTCHSDSQSLKSGPQE
QSEDRKYIEGGELPCAPYSDSDQISEDGFESIVEDRSQSPVHPTVFALVNQMSPTWTRSL
SCFETTDTPTRPMSPKPHSPGLGWTQRRSFRYPSRSVASSLCSLGQGVSTDGISDPPQRP
TSLKPRTAQLTTTHSFDSESLLEDSSSDSQSQNSLNSASLNNKPEHVQHSTEPAIQSEER
RQQGSACVLRMKSRQQGKAAPRPISDLYGWTVSLQGIREVALDLERKSNPTKTRRRSCSC
ETLTDVENIHRKTLNMRRSLRQLSTPTSQKHEKVRARLSLTSPEQFPSVPLKDHFFSQST
PVGLDFLGWPHRASFSELNLSTPAQEERGQVPPLALVITDGPQDKSGLADEVGSEDDLYN
EFRSSSNRFGHPGGGGEQLAINELISDGSVCAEALWDHVTMDDQELGFKAGDVIEVVDAT
NKEWWWGRVLDSEGWFPASFVRLRVNQDEPMEEYLAHLDGASEGGGASMGGPLGPGLPCK
EQMRANVINEIMSTERDYIKHLKDICEGYIKQCRKRTDMFTEEQLRTIFGNIDELYRFQK
KFLKALEKKFNKDHPHLSEIGSCFLEHQTNFQIYSEYCNNHPNACVQLSKLMKIKKYVFF
FEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNAMKNV
ARLINERKRRLENIDKIAQWQSSIEDWEGEDILSRSSDLIFSGDLTKISQPQAKGQQRMF
FLFDHQLVFCKKDLLRRDILYYKGRLDMDQMQVVDVEDGKDKDFNMSVKNALKLCSPGGE
EVHLLCAKKPEQKQRWLRAFADEREQVQHDLETGFTITEVQKKQAMLNASKSHPTGKPKA
LALQHLLALRSPLLHPKTSKCLRFSEPSGPLAPRATLTSPLLPEGPQRRQGRGVRVPPGV
LRRAISWVSSQSREPIE
NT seq
7974 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcaggcgatgcgaacggtactgggacgcagggctgtgaaccggagcgttct
ggagacggaggactggatgaggtgcagatgcacctcgcctgtttaccggagagatacatg
agagcgaagttctccctctccgcgtacatattttgttggacagtagtaaagttgtgtcag
agattaagaccgtcgccagttcttccccaggccccagctttagaggattctggaagtgag
gcagcctgtctggatgatggggagtctccgcgggaggagcatggagagcaacaggaccac
caggaatggtgtgagccagtttctgaagcagcacaggacataaaagaggaatattttgac
acacactcactgtacagtgatactttctctggcttgagtcatgaaactgaggactgctgc
aggacaccgctcaactctgtgggtcatctggacttacactcatcttcggttagaaggaga
gatccctcttcttcgaatcaggctgacagtctcagtagaacagaggaccgagaacaattg
caaaagcagactgaaaatatggggatcatgtacatgggagttgatggcactggaatgtct
gaagctaagggtgctccggaatgtgaggaagttttcggcaattttccagcgggacctgga
gttgattcttcttcaaggaatgaccaatcctacatcgtaacacccctactggccttagag
aacgctgtagaaccacaagcactcactgagccatgtgctaatgactcattattgacctta
acagactgtgatggagccaagtctcagtttgctgacacttttgagggaagatcgaaatgg
gatcaaattaacaaaaatatcacagacactcagtcaggacacaatgagccacggatacag
ttcataacctcaagtgagaagaaattacagaaaaatgatattgacagtagtaacactgaa
gtacagttgatttcgaatgcatctattgcaaatctttctgtatacgagtctgtatcagtt
gagaagcctattgaacaggaatttgaggagtcaacaaaacccagccaaccacagccctca
gtagagcacagccaatcacaaccctcattagatcacagcacatcacagccctctgtagag
cacagccaatcacagccctcagtagagcacagccaatcacaaccctcattagatcacaga
acatcacagccctctgtagagcacagccaatcacagcccccaatagagcacagcaaatca
caggcgtcaacagaacataaccaaacacaggattctgtagaatgcagccaatcacggaat
tcagcagaacacagccaatcacagtccccaacagtagacaggccatcacaaggttttttt
gaacacagccaatcacagaattcagtagaacacaggcaattactagactcaatagaacac
agtcagtcacaggattcagtagaatgtaggcaatcacagaatttagtagaaaacagccaa
tcacaagactcagtagaacatagtcagttaaaagattttgtagaatgcagtcagtcactg
tattcagtagaacacaggcaatcgcagagttcagaagacatgccatcccaaaatttcatc
aaacaaagccaatcacagactccagtagaacacaccaaatcacaggattctgtaaaatgc
agtcaatcacagaattcagtagaacccaaccaatcgcaggactcagtagaacacagccag
tcacagagctcagtagaagacatgctatcccaaaatgtaatcaacaacaacaacaaatca
caagacccactggcctcactacaattcacccagtcacaggattctgtagaacttagccca
tcaaatgattctgtagaatgcatccaatcacaggattcattagaaaacagtcagtcacat
actacatcagaactcactcagttacagtattctatagaatgtagccaatcacaaaattct
atacaaaacagaaaatcacaggatttaacagagcaaaaccaattacagaacaccatagtg
tacagccaatcacaaactccagtggaacatggccaatcaaaaactcctttggaacacagc
caatcacaagcttcagtggaacacagccattcacaaacttcagtggaacacagccaatca
cagcttgattccattaaggcaaattctatgaacacccggtggactgtgacagagtacgac
tctggtttaatttcaaacacagcggctctttatgaaaagggacaattagaacaggactgt
gtggacgcatgcataaattgtgaagtcagtcaatcattgaaaacatctggaaggctttca
ttatacgatagtgacagagaactcgatttgaactttgaaaagaataacagtccaaatttt
aaaaagcagaatttaaatgacatcccacctgttgtttctgaatgcgagtcttttgcagct
gagagagctttctcaaatgtgcctaatacaacttctgctggagtgtcagattccctgaat
cagcatgtgatcaatgaccggacctccgaacaatcagatctgcagaccagacctcattac
ggtcaacataatttcccagttttacaaatgcacactgaaaaaaaggattactcagatagt
agttatcacatggacagtcattgcttagaggacattgtttcagaggaacatgagcctgag
gcagatttttatgaaactagcataattaactttaacacacagagtaaattcactgaagca
caagtgtatgttaagagtaaaacttttgaaaccaatgatggtgacattttagaaggaacg
atgaagaatagcaaaacacgtcacattattaaagggtaccagaaagaatgcacaatagtt
ccctcgatagaacagtcagtaatttactctgatagttcgggatgcatagaatacactagg
cctaagtcaccaagtgtcgtgtgtcctgacattaagacagctgaatctgaagggtgtcct
gtagacagtcctgtcgaatctctggctagtctgtttgagatttcggatgacaaatctcaa
gttagccccacagatgtttgccttgggctcagtgatggccttcatatgaactgtaaacaa
gtagcacatcgcgttatagaatataaagagacctccaaacaacctgacaccctgtctgac
aaacaagcaagacaaaacaagtcagttgaaacaattgagccagttcttgatattttgtct
agtgcatgcactgatcctttcacaaatacccaatccccttttgattattcccagctgaac
agtagaaacaatgaatacagctcagacacaaataataatattaaagccattcattttgaa
gagtgtgcctcaggtgaacagatctctttgcctaattctttgcaaaaatacagcaggttt
agtatcaatgctggatctttagtctcaaaaggtggtgatcgcaaagacaatgcccttcct
tttcaggctactccctttaaagtacctgaaatgaagtctgcaattgacagaaaagataat
gttgctagaccctctgcattcaacgaattcagcagccatagagatcctatactaaagcag
ctctgtgattgctgtggtggaaaggagtgccagctgcactcatctgcagtggaaggagac
cagacagcaggaggatttcagttcaagggcacagacggcatcagtcagagcagatctgca
gtgttgcaaacctcgagtccctcacacacagatgacaaatgcaacacacacggagaggtt
aatgcagactctacaaactgtgaattttcacatattggccatttgcttgcacacaaacat
ccggagcccgtccaagagaaaaacatattaccactgagtggctcacttaaggtcgatgat
acttattcatcggaaaacatggagagaaagcttgaaactttcacggctagctctcctgaa
agcactgattcaacacgtgaaacttctgatcctctttgtaagcgatccttgcaactgtgc
aacgctgagatcgaaggcgcatttgttacatgttgccgtattttacccatcactaattta
gaggccattttagagtcagaccgttcaccagagagctcatttgtgatcgaaaatggactg
ggggagcaacaggaagcaagtccatcatcagaaggtggatttagtgaggaatggggctct
tgtgatgacatcacaaaccgcccacatgcgaacatttctgccatgtgtacaaaagccaac
atagccactgtcatgaatgaacaatatgctggagaaacaattagctctttatcaaatggt
tttgatagcagtgatggtaatagtgtttccagttttgtgtcacaagaccttgactccagt
accaacagtgaagagacagaggacagcactcagtcaacatctagtcttcgcagctcggca
agaaataagagaacccagtcaggaaagggatctgtgttttccgttttttctcgaatgccc
tcattccgcaagattaaacgagaacacaaagccaatagcaaggttgatcaagaaattaag
gaaaccaatgaggaaggagatgaacagggtgagttcaaaaggttacccacacataacaat
tccatcccttcactgtacaagacctctatttctcaaagtacagatcatcttacagacatt
acagagtttgttgacaactccaatgatgatatttttgaaaaagcgtttgctttaaatatg
cagaatagagacaaacagacacaatcccaaaagttgtatcagcagcacaaagatggggat
gcactgaattttagagtgtctgcaatgccagagggattgcaacaaaaaagaagcaagagt
accgataacttaaacttgcgcatgaagctggcaatggctcacaagtccctgtctagcctg
tttgagtccagatatcctgagagggacaaccaggagcagattgcacagccagaaaacgag
gaggtaaaaaccaagcagtcctggaggaagtcgaaacggtctaaggaagcggaacttttc
aaaagaactctatcggttccggggatggtctgtgacaggtccatacatcagagccatgtc
gattgtgccttctgtgctcctcagaacaggtccagactcaatagctcaccagcttcccaa
aagagtttgaggaacacgtgtcattctgattcacagagtttgaaatctggtcctcaggaa
cagtctgaagacagaaaatatatagaaggaggtgagctgccttgtgctccttactcagat
tctgaccagatctcagaagatggcttcgagtccattgtagaggataggtcgcaatcaccc
gtacacccaactgtttttgcacttgtaaaccagatgtcacctacctggaccagatcttta
agctgttttgagaccactgatacaccaacgaggcccatgagccctaaacctcacagtcct
ggcctgggctggacacaacggagaagcttccgttatccctcgagatctgttgcatcttct
ctctgctcgctcggtcaaggagtgagcactgacggtatctccgatccacctcagagaccg
acgtctctgaaaccaaggacagcgcaactcacaacaacccactcttttgattctgaatcc
ttactagaggacagcagttcagacagccagtcgcaaaatagcctgaattctgcatccctg
aacaacaaaccagagcatgtacagcacagtactgagccagccatccagtcagaagagaga
agacaacagggaagtgcatgtgtgcttcggatgaagtccagacagcagggtaaagctgca
cccagacccatctcagacctctacggctggaccgtgtctcttcagggcatcagggaggtg
gcgcttgatctggagaggaagagcaatccgaccaaaacacgtcggcgttcatgctcatgt
gaaacattgactgatgtggagaacatccatagaaagacgcttaacatgcggcgaagtttg
cgtcagcttagcacaccaacatctcagaagcacgagaaagtgcgcgctagactttccctc
acttctccagagcagttcccctctgttcctctcaaagaccactttttctcccagagcaca
cctgttggactggattttttgggctggcctcaccgtgcatcattttcagaattgaatctc
agcacaccagcacaagaggaacgtggacaggtcccccctctggccttggtgataactgat
ggaccgcaggataagtctggtcttgcggatgaggtggggagtgaagatgacctgtacaat
gagtttcgcagctcctccaaccgattcggacatccaggaggaggaggagaacagctggcc
ataaatgagctgatcagtgatggcagcgtgtgcgcggaggctctatgggaccacgtcacc
atggacgaccaggagctgggcttcaaagctggagatgtcattgaagtagtggacgccaca
aacaaggagtggtggtggggccgggtgctggacagtgagggctggttccccgccagcttt
gttcggttacgggtgaaccaagatgaacccatggaggaatacttagcccatctggacggg
gcctcggaggggggtggggccagcatggggggtcccttagggcccggtctgccctgcaag
gagcagatgagagccaacgtcatcaatgagatcatgagcacagagagggattacatcaaa
cacctgaaggacatctgtgagggctatataaaacagtgtcggaagaggacagatatgttt
accgaggagcaactgcgcactatctttggaaacatcgatgagctctaccgttttcagaag
aagttcctcaaagccttggagaagaaattcaacaaagaccatcctcacctcagcgagatt
ggctcctgcttcttagagcaccaaacaaactttcagatctactctgaatattgcaacaac
caccccaatgcctgcgtgcagctctccaaactgatgaagatcaagaagtatgtgttcttc
tttgaggcctgtcgtctgctccagaagatgatcgacatttccttggatggattcctgctt
actcctgttcagaagatctgcaagtatcctctgcagctggctgaactgctgaagtacacc
aacccacagcacagagattataaggacgtggaagctgctttaaatgcaatgaaaaatgtg
gcccgactgatcaatgagagaaaacggcgtctggagaatattgacaaaattgctcagtgg
caaagctccatagaagactgggagggtgaagacatcttgagcagaagctctgatctgatt
ttctcaggagacctgacaaagatctcccagccacaggccaaaggccagcagcgaatgttc
tttctctttgaccaccaactggttttctgtaagaaggatctgcttcggagggacatcctg
tactataagggtcggttagacatggatcaaatgcaagttgtggatgtggaggacgggaaa
gataaggactttaacatgagtgtgaagaatgccttgaaattatgttctcctgggggagag
gaggtccaccttctgtgtgccaagaaacccgagcagaagcagcgctggctgcgagccttt
gcggatgaacgggaacaggtccagcacgacctcgaaacaggttttacgatcacagaggtc
cagaagaagcaggccatgctgaatgcatctaaaagtcacccaacagggaagcccaaagct
ttagctttacagcatcttttggcactcagatctccacttcttcacccaaaaacttccaag
tgcctacgtttttctgaaccttcgggacctctggctcccagggccaccttaacttcacct
ctcctccctgaaggccctcagcgtaggcaggggcggggggttagggtgccccctggggtc
ctgcgcagggcaatatcttgggtgtcctctcaaagtagagagccgatcgagtag
DBGET
integrated database retrieval system
