Carassius gibelio (silver crucian carp): 127950499
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Entry
127950499 CDS
T08819
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127950499
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127950499
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127950499
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C64
127950499
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
127950499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Gla
Motif
Other DBs
NCBI-GeneID:
127950499
NCBI-ProteinID:
XP_052403567
LinkDB
All DBs
Position
B2:25019958..25026671
Genome browser
AA seq
1108 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLFFPAHTSMSIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVSGPPKKGSELVKVMGLSNYHCKLLSPILTRYGMDKQTGTAKLLK
EMNQGEIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANLNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLPLPRLPAALLPKAWGVPQELIRKYVS
LDSNGSCVIGGERSLQDKYLLRLVGVMEDVFMDKHGIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHVPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLGSLTACTWCHGTSVRRVHGDGSVVYLDGDRTNTHSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDPTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQDEYNPVAIEGAHVQDGRDGSESTTHPPTKI
ILTGQKGKTLHKEELVMSKTERVLQHSISEQAALSQRRSTDRLRQQDPRPPSPSSSSSSA
PPTPTKVPPPSGEKKIRVTTSDGRQAMLTLQPHTTYGELQNSIVQVFNLLPGQLCIRHGF
PPRELPPPRPEDQNQPVALQHGDRISVEALKESSPDTHMTQTHSHTPQTHAHSDPRLSRT
SSREIQDNIDLEMSSLCLLAALMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHC
TLPHLSGKTFVFSAAEERLELCVDTAGHFPVGPDVEELVQEALSQLRSDAASHSREGSPA
HGLRLGAGGAVRKKEQTVTAFQGKGHSLGSAPPEHPPIRRQHSSGVDLSNSARGEEITLS
GEELVRVAPGMLTLRESRGLGLEPAVIEAQRQRLQEMVSNIQASMDKHLRQHAVARHDVK
EEEAPDKQEDMESHGAEPPSTFEPMDQS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcaaagcagaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttcttccccgcacacacctccatgagcatcgagtgc
actgaatgcggccagagacacgagcagaagaacctcgcgaatgtggaggaagtaactgac
ccagatgtagttcttcataatttgctgagaaatgctttgctgggtgtgtcaggccctcct
aaaaagggctccgagctggtgaaagtgatgggactgtccaactatcactgcaagctgctg
tctcccatcctcacccgctatggcatggacaaacagacaggcacggccaaactcttgaag
gaaatgaaccagggagagatcttcgactgctcgcttcttggggaccgtgcttttctcatc
gagcaagagcatgtgtccactgttgggtatggacgggacaggtcagggagcttgatctac
cttcatgatactttggaggaaatcaagaaagcaaacttgaacagagagtgtcttattccc
gtgcatgtggatggagacggacactgcttggtgcacgccgtgtccagagcactagttgga
cgtgagctcttctggcatgcccttcgagaaaacctaaaactcaatttcaagcagaacctc
gaccgctacaaagcccttttccaggactttatagatgctgcagaatgggaagatatcatt
aatgagtgtgacccattgtttgttcctccagaaggcgttcccctggggcttaggaacatt
cacatattcggcctggcgaatgtactgcacagacccataatcctgttggactccctgagt
ggcatgcgcagctcgggcgattactccgccactttcctgccaggcctggttccagaggag
cagtgccgaggaaaagatggcactctgaacaagcccatctgcatcgcgtggagtagctct
ggcagaaatcactatctacccctcgtgggcatcaagggcttgcctttgccccgtctacca
gctgcattgctcccgaaagcttggggtgttcctcaagagctgattcgcaaatacgtgagc
ttggactccaatggaagctgtgtgatcggtggcgaacggagcctgcaggataagtacctg
ctgcggctcgtaggcgtgatggaggatgtcttcatggacaagcacggcatccaccccgct
ctagtcgccgatgtccaccagtatatataccgacgcactggagtgatcggcgtgcagccg
gaggaggtgacagaagcggctaagaaatctgttcaggagggtcgtctccatcgctgcctt
gtctgcaatgctctttcagagctccacgtcccagcagagtggctcataccgggagggaaa
ctctacaacttggccaagtcgactcacgggactctgcgtgcggacaagaactacagcttt
cctttaaatagtttggtttgttcctataacccagaaaaagatgtgctggtgcccgactac
aagcttggctcactgacggcttgcacctggtgtcacggtacttcagtgcgacgcgttcat
ggcgacggctctgtcgtctatttggatggagaccgtaccaacactcactcacagggtggg
aagtgtgggtgcgggttcaaacacttctgggaggggaaggagtacgataatcttcccgaa
gctttccctatcactctggagtggggcggccgtgtggtgcgagagaccgtttattggttc
cagtatgaaacggatccgactctcaacagcaatgtttatgacgtgacgatgcgacttgtc
acgaagcactttcccggagagttcggaagtgagattctagtccaaaaagtggtgaacacc
atcttgcatcacactgccaagaggagccaagatgaatacaatccagttgccatcgaaggt
gctcatgttcaggatgggagagatgggagcgaatcaaccactcaccctcctactaaaatc
atcttgacgggacagaaaggcaaaaccctgcataaagaagagctggtgatgagtaaaacc
gagagggtcttgcaacatagcatcagcgagcaggcggccttgtcccagcggcgtagcaca
gaccgcttgcgccagcaggatccccgcccaccatctccttcctcttcatcatcctctgct
cctcccacacccactaaagtgccaccccccagtggagagaagaagatacgtgtaacgacc
agcgatgggcggcaggccatgcttacactgcaaccgcacaccacctacggtgagctccaa
aactccattgtccaggtcttcaacttattgcccggacagctgtgcatccgacatggcttc
ccacccagagagctgcccccaccgcgtcctgaggaccagaaccaacccgtggcgcttcag
catggcgaccgcatatctgtggaagcgctaaaagagagctcgcccgatactcacatgacc
cagacgcactctcacacacctcaaacgcatgctcactctgacccacgactcagccgcacc
agtagcagggaaattcaggacaacattgaccttgagatgtcatcactttgtctcctggca
gcacttatgggtgaagatgtctggtcatatgccaagaaactgcctcacctgttccaacaa
ggaggagtcttctacaatattgtgaagaaagacatgggtctgttagatgggaagcactgc
acactgccccatttgtcgggtaagacgtttgtgttcagtgctgcagaggagcgtttggag
ctgtgtgtggacacagccggtcattttccagtgggccctgatgtggaggagctcgtccag
gaggccctttcccaactccgctcagacgcagcctctcatagccgtgagggaagccccgct
cacggcctgcgattgggcgccggcggtgcagtgcgcaagaaagagcagactgtcactgct
ttccagggcaaaggtcactcactgggttccgcccctccagaacacccaccaatcaggcgg
cagcacagcagtggcgtggatctcagcaacagcgctcgcggtgaagagataacattgtca
ggggaagagttggtgcgcgtggccccgggcatgctcactttacgcgagagccgcggtttg
gggctggagcctgccgttatcgaggcccaacggcagcgtctgcaggagatggtctcaaac
atacaagcgtctatggacaaacacttgcgccagcacgctgtagcaaggcatgatgtgaag
gaagaagaggctcctgacaaacaagaggatatggaaagtcacggtgcggagccacccagc
acctttgaacccatggaccaatcttga
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