Carassius gibelio (silver crucian carp): 127950593
Help
Entry
127950593 CDS
T08819
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127950593
09122 Translation
03013 Nucleocytoplasmic transport
127950593
03015 mRNA surveillance pathway
127950593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127950593
03041 Spliceosome [BR:
cgib03041
]
127950593
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127950593
Spliceosome [BR:
cgib03041
]
Complex C
Other components
EJC/TREX
127950593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
127950593
NCBI-ProteinID:
XP_052403699
LinkDB
All DBs
Position
B2:complement(23126184..23149260)
Genome browser
AA seq
1760 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSTQH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEKEAREAAETDGTDHEDHTEANAPNQ
GVAPSLVDQHKGGTAVAGGFGVNVSESEGLREKETPGQPSPSAPAQPGAIASLSVQVVRE
RGPTSSHVAADSDDDSEGGDDNDEEEEEWNASAQRSRRAQPPKSQLVRERSGGSQQQQQP
PPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRMSSSSSSGSSSS
DSRSSSPEPAGDSTERRPGPLTLLARKMASEGAFSGAGKRDREGMDGQRSHHEGVVSAIT
HTANAASVLSYPSSVISNQAVSVVRTAAVEASDGMKQNEGGHLLWEQENKKRERQRDQER
QKALEKEREGKEKALEEERARVLQQERQEREEALKRERALQREREEKEKALKREREEREK
LEREQALEREQLERKQALEREMQEKERLERERQEALERERLERERLEKERQEREKALERE
RLERERLEKERKERERALERERLERERLEKERLEREQALERERLERERLEKERQEREQAL
ERERLEKERLEKERQEREQALERERLEKERLEKERQEREQALERERLEKERLEKERQERE
QALERERLEKERLEKERQEQKQALERERLEKERLEKERQEREQALERERLEKEQLEKKRQ
EQERQEKEQVLERERQEKERLEREQAFERERLEREAALEKERQEMERAKEQQRLEKEKAE
KERHEREAALKRKRQEQERLEKEKALEEEQLQKEQVLEREREAQRKAEEEREQTLEKEKE
EQERGLKEEQQRALEERERHLEQKRVQEEKEKALNIEKEEEHEKERESCLPPGKRGHDIS
GLSYLAAEPASQKSPMEKPDESETGEFQSAGKDARYTEPVPRKSPTLATPLSPQSSSKKS
RFLRDAPVTTSLTSSPTSVLKRPRTFSDSPMPQTPSVPLASKPEGKDASQAHQTSVLASA
SNELENKTPEVPAKQHAQQEEKMETSENSEASKDTKQKPLRREKDEEKPLSDEKKRGRER
EKKQVEKKRRKSSSSSESSSSNSDSGSSSSSSRSSSSSSSSSSEEEKINCSSGDRKSKEV
QKESSSQATEKVVAEKPPTAQCKKRVFTRQEGKDTGKEEVIQTKKPCLELQDEKVTRGRK
AEIEDDDTNKDTASEVKEAVMAEPEKVPESSEESTTAKTFSARRISLGSSKQSPGVVSSE
GEAEAASSAIAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIKPALGQEAVLDLHPEE
MHLSGEEEGGERGDQDLKIRRTVTQVVSSDTQENGQKESKRSEHEDEEERSEEQDRLSQE
EKIEGSIQVSMEMEPSSPGRDIDMKTVTPSDTLIRRSISQQKSGVSITIDDPVRTAKQPS
PPRGKLSNIVHVCNLVRPFTLGQLKELLNRTGTVVEEGFWIDKIKSHCYVTYSSVEEAMS
TRTALHGVKWPQSNPKFLSVDFCMQEELDFHRGLGPAGEKPTEEPHGAAAAGPGRPIPPP
LLPERDQWAEREREMERRERARAEREWDRDKVRDFSKPGEEREAGARRSRSRDRERRRKE
RGKSKEKKTDKKEKLEDPPAKLLDDLFRKTKAAPCIYWLPLTEELAAQRAAARAERMRER
EKRRKEMEEEDKKRDEERRERMKTGGATGGEGERDRDRGREREREGDKRKEGYRRPGGNS
ASGSRRSRSHSDPPLRDRRH
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggaggccgctccattcgctccgggtagcg
gatttgaaggcggcattggaagagagagggcttccgaaaagcggacagaagaatgctctc
atcaagaggctcaaaggggctcttatgttggagaaccttcagaaaacctccactcaacac
attggcctgcaacctaactcccggattggggaggaaatgagtcagaacagcttcattaaa
cagtacttggccaaacagcaagagcttctgaggcagcgtttggagaaggaagcacgagaa
gcagctgaaactgatggaacagaccatgaagaccacacagaggctaacgcccctaaccag
ggtgttgctccctccttagttgaccaacacaaaggaggaacagcagtggctgggggattt
ggggtgaatgtgagtgagagtgaagggctcagagaaaaagaaacgcctgggcagccgtcc
ccctctgcacctgcccagcctggcgcaatagcctctttgtcggtgcaggttgttcgtgaa
agaggaccaacatcaagccatgtagcggctgacagtgatgatgacagtgaaggcggagat
gacaatgatgaagaggaggaggagtggaatgccagtgctcaacggagtcgtcgagcacag
cctccaaaaagccagctggtgagggaaagatctggtggctcgcagcaacagcagcagccg
ccccctcaacacatacctttactatcacagcagctcagacagcccactcctcccccatcc
cctcctcctgaactctcttttccactcccagacacccctaaacagagcccgcctagtccc
ggagagcccccatctaggcagcgtatgtctagctcttcgagctctggtagttccagtagt
gacagtcgtagcagtagccctgaaccagcaggtgattccacagaacgcagaccaggccca
ctgaccttactggcacgaaagatggcatctgagggagctttctctggtgcaggaaagcgt
gatagggagggaatggatggacagagaagccaccatgagggagttgtgtctgcaattacc
cacacagctaatgcagcatcagttttgtcataccccagttcagttatctccaaccaagcg
gttagtgtcgttagaaccgcggcagtggaagcgagtgatggtatgaagcagaatgagggt
ggccatcttttatgggagcaagaaaacaaaaagagggaaaggcaaagagatcaagagaga
cagaaagccctagaaaaggagagagagggaaaggagaaggcattggaagaagagcgagca
cgggttttgcaacaggaaagacaggaaagagaagaagctctaaaacgggagagagcttta
cagcgagaaagggaagagaaagaaaaggccttaaagcgggagagggaagagagggagaag
cttgaaagagaacaagcattggaaagagaacaacttgagagaaaacaagctctggaacgt
gagatgcaagaaaaggagagactggaaagagagaggcaggaagctttagagcgggaaaga
ttggagagagagagacttgaaaaagaaagacaagaacgagaaaaagccttagaaagggaa
agacttgagagagagagactcgagaaagaaagaaaagaacgagaacgagctctagagagg
gaaaggttggagagagagcggcttgagaaagaacgactagaacgagaacaagcactagag
agagaaaggttggagagagagaggcttgagaaggaaagacaagaacgagaacaagctcta
gagagggagagattggagaaagagcggcttgagaaggaaagacaagaacgagaacaagct
ctagagagggagagattggagaaagagcggcttgagaaggaaagacaagaacgagaacaa
gctctagagagggagagattggaaaaagagcggcttgagaaggaaagacaagaacgagaa
caggctctagagagggagagattggaaaaagagcggcttgagaaggaaagacaagaacaa
aaacaagctctagagagggagagattggagaaagagcggcttgagaaagaaagacaagaa
cgagaacaagctctagagagggagagattggagaaagagcagcttgagaagaaaagacaa
gaacaagagaggcaagaaaaagaacaagttctagagagggagaggcaggagaaagaaagg
ctagaaagagaacaagcttttgagagagagagactggaaagagaagctgcattggagaaa
gagagacaagaaatggaaagggcaaaagaacagcaaaggctggagaaagagaaggctgaa
aaagaaagacatgaaagagaagctgctctgaaacgcaagaggcaagagcaagaaaggctt
gagaaagagaaagctttggaagaggaacagttgcagaaagaacaagttcttgagcgtgag
agagaagcacagaggaaagcagaggaggaacgagagcaaactttggaaaaagagaaagag
gagcaggagaggggtttaaaagaagagcaacagagagccttggaggaaagggaaagacat
ttggagcaaaaaagagtgcaggaggaaaaagaaaaggctttgaacattgaaaaagaggaa
gaacatgagaaagaaagagaaagctgtcttcctccggggaagcgtggtcatgatatcagt
ggtctctcctatctagcggccgaacctgcttctcagaagagtccaatggagaagccagac
gagagtgagactggtgaatttcagagcgctggcaaagatgctcgatatacagagcctgtc
ccacgaaagtcacccacacttgcaacaccactatccccccaatcgtcttcaaagaagtcc
cgctttctaagagatgctcctgtgacaacttctctaacttcatctccgacttctgtgctg
aagagacctcgtactttctcagacagccccatgccacaaaccccctcagttccattagca
tctaagcctgagggaaaagatgcctcccaggctcatcaaacatcagtccttgcttcagct
tccaatgagcttgagaacaagacccctgaggtgcctgccaaacaacatgcacaacaagag
gaaaagatggagacatcagagaatagtgaggcaagcaaagatactaaacaaaagccactc
agaagagagaaggatgaggagaaacctctttcagatgagaagaaaagaggaagagagagg
gaaaagaagcaggtggagaagaaaagaagaaaatcatcatcctccagtgagtcctcctca
tcaaactcggattctgggtcttcatcctcctcctcacggtcctccagttcatcgtcatca
tcatcatcggaggaggagaaaattaattgctcttcaggtgataggaagtctaaagaagta
cagaaagagtcttcatctcaggccacagaaaaagttgtggctgaaaagcctcctacagcc
caatgcaaaaaacgagtcttcacaaggcaggagggaaaagacacgggcaaagaggaagta
atccaaaccaaaaaaccctgccttgaactacaagatgagaaggtaacaaggggaagaaag
gcagagattgaagatgatgacactaacaaagacactgccagtgaggtgaaggaggctgta
atggcggagcctgagaaggttccagagagcagtgaggagagcaccacggcaaagaccttc
tctgcccgaaggatttctctcggcagcagcaaacaatctcctggggtggtgagttcggag
ggggaagcagaagctgcaagcagtgctatcgctggcaggaagaggagatggggctccagt
acagctgtcactgccaagaaaccctccatcagtatcaccacagactctttgaagtcttta
ataccagacatcaagcctgccttgggtcaggaggctgtgttagacctgcatccagaggag
atgcatctctctggggaggaggaaggaggagagaggggcgaccaagacctgaaaattaga
agaactgtaacacaggttgtgtcctctgacactcaagagaatggacagaaagaatctaaa
agaagtgaacatgaggatgaggaagaaagaagtgaagagcaggatagacttagccaggag
gaaaaaattgaaggctcgattcaggtttccatggagatggagccatcatcccctgggcga
gacattgatatgaagacggtcactcccagtgacacactcattcgccgttccattagccag
cagaagtcgggtgtgagtatcaccattgatgacccggtccgcacagccaaacagccctct
ccacctcgtggcaagctgtctaacattgtccatgtctgcaacctggtgaggccgtttacc
ctggggcagttgaaggagctgttgaaccgcacggggactgtagtggaggaaggtttctgg
attgataagattaaatctcactgttatgtcacatactctagtgtggaagaggcgatgtcc
actcgtacagcactacatggggttaagtggccccagagtaaccctaagttcctcagtgtt
gatttctgcatgcaagaggagttggacttccacaggggtttgggtccagctggagaaaag
ccaacagaggagcctcatggggcggcagccgctgggcctggccgtccaatacccccacct
ctccttccagagcgtgatcagtgggcagaacgagaaagggaaatggaaaggagggagaga
gcgcgtgcagagagggaatgggaccgagataaagtgagagacttcagcaaacctggagag
gagcgggaagctggggccagaagatcgcgttcacgagatcgcgaaaggcggcgcaaagaa
cggggaaagagcaaagagaagaaaacggataaaaaggaaaaactagaggatccacctgct
aaactgctggatgacctcttccgcaaaaccaaagcggctccgtgcatatactggctcccc
ctgactgaggagctggcggcacagagggctgcggctcgtgccgagcgcatgagggaaaga
gagaagaggaggaaggagatggaagaggaggataaaaaacgtgatgaggagcgacgagag
aggatgaagaccggcggggccacgggaggggaaggtgagagagaccgagaccgaggtcga
gaaagggagcgagagggggataaaaggaaggagggataccgcaggcctggtggaaacagt
gcaagcgggagcaggaggtcacgaagccacagcgaccctccgctcagagatcgacgacac
taa
DBGET
integrated database retrieval system
