Carassius gibelio (silver crucian carp): 127950753
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Entry
127950753 CDS
T08819
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127950753
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127950753
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127950753
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C46: hedgehog family
127950753
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Morphogens
127950753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
DUF7467
Hom_end_hint
PT-HINT
Motif
Other DBs
NCBI-GeneID:
127950753
NCBI-ProteinID:
XP_052403965
LinkDB
All DBs
Position
B2:complement(18666176..18670337)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLCFISLLLTPCGLACGPGRGYGKRRHPKKLTPLSYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVHYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIKDLKAGDRVLAADDEGNVFLSD
FIMFMDHDPTTRRQFIVIETSEPFTKLTLTAAHLVFVGNASASFGTTATFASNVKPGDTV
LVSEGTGKSLKSVTVKRIYTEEHEGSYAPVTAHGTIIVDRVLASCYAVIESHKWAHWAFA
PVRLSHKLMTWLFPARDSNVTFQEDGIHWYSEMLFHIGSWMLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaagactgcatctgaagcaaattgcttttctgtgttttatcagcctgcttctg
acgccttgtggattagcctgtggtcccggtagaggttatggaaaacgaagacatccaaag
aaattaacccctttgtcttacaagcaattcattcccaacgttgccgagaaaacgctcggg
gcaagcggcaaatacgaaggcaaaatcacaaggaattcagagcgatttaaagagctgatt
cctaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagaggtgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccaggtgtgaaactgcgcgtcactgaaggctgggatgaggatggtcaccatttcgaagaa
tctttgcactacgagggacgggcggtggacataactacctcggacagggataaaagcaag
tatgggatgctatctagacttgcagtggaggcaggattcgactgggtccattacgaatcc
aaagcccatatacactgctctgtcaaagcagaaaattcagtcgctgctaaatcgggggga
tgctttcctggatctggtacggtgacactcgcagacgggaggaggaaacacatcaaagat
ctaaaagcgggcgaccgggttttagctgcggacgatgagggaaatgtcttcttgagcgac
ttcatcatgttcatggaccacgatccgacgacgagaaggcaattcatcgtcatcgagacg
tcagagccttttacgaagctcaccctcacagccgcgcacctcgtcttcgttggaaacgcc
tcggctagttttgggaccacagcaacgtttgccagcaacgtgaagcctggagatacagtt
ctggtgtcggaaggaacaggcaagagcctcaagagcgttacagtgaagaggatttacact
gaagagcacgagggctcttacgcgccagtcaccgcgcacggaaccataatagtggatcgg
gtgctggcttcgtgttacgcggtcattgagagtcacaagtgggcgcactgggcttttgca
ccggtcaggttaagtcacaagctgatgacgtggcttttcccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcagagatgctgtttcacatcggctcgtgg
atgctggacagagactctttccatccactcgggatttcacacttgagttga
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integrated database retrieval system