Carassius gibelio (silver crucian carp): 127950794
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Entry
127950794 CDS
T08819
Symbol
si:ch211-241e1.3
Name
(RefSeq) laminin subunit alpha-3 isoform X1
KO
K06240
laminin, alpha 3/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04382
Cornified envelope formation
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127950794 (si:ch211-241e1.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127950794 (si:ch211-241e1.3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127950794 (si:ch211-241e1.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_I
Laminin_G_2
Laminin_II
Laminin_G_1
EGF_laminin
EGF_LMN_ATRN
BORCS6
DUF948
UPF0738
Motif
Other DBs
NCBI-GeneID:
127950794
NCBI-ProteinID:
XP_052404049
LinkDB
All DBs
Position
B2:complement(2252613..2266620)
Genome browser
AA seq
1332 aa
AA seq
DB search
MSASVACSSGTLRALALGALLGLVYGGPRPENRREHAEWTQRVQYPAVDDAQRVMFPSVD
DPQRCAAGFYLDRSGAFARCVRCSCNGFSDECEENTGRCLKCSDNTAGDHCERCRDGYYS
HAAQRRCSACPCPFSNLANNFALGCTQSDGRLLCLCKDGYTGERCERCAPGYYGDPLVSG
GRCRLCSCPGNLCDSNTGVCRNSLELQDTNTEERCEECDNCAQKLLNDLEKFDAELRRIK
DQLDVDSLRPSSKEHLRKLEEAITATRDLVNTFSFTVDSQVPKINQLEQDVISVTNDMDK
LKEQVRKQSEDAQKALSNAENSHQRAKDLDTETQNLLRKIQELLKQLMDSESSGSTLPHA
DLAKLLEQAQSMVKEMQKRSFTPQKDAAKTEQAEANKFLEDVRNITKRCDENEAASKRVD
SLLSSYEDKLKALEDLLKQAGDTLKNASGQNDINAEGLRDILKRVKDLERERDRVQDQIA
LAVKHLKDTEDALNMFNDSRTEYEKLAAQLNRSKTELEDRVQILSQAAAKEKIVKQAEEH
AENMHRLAKELQEAVQNVSGRSGVQTALSGIEAYKNITDAVNAAEEMAKRAKEAADKALN
DVIEGDLFNRAIDLKNDSNNLLEDAKTATKDLEGATKDLKNQKKRLQAAEKKKEALGKDL
LAVQEGLKGIQRDDIGKIIDAAKKTAAAAIRSTNDTMDQLNNIRAEVTNISITPTLPNMD
RALNNVEMTIRNLSGSIPSLLDKIDEINSELSTGNNVTDNIKKIKELIEQAREAANRVVV
PMKFTGKGYVELRPPQDLDDLRAYTALSLSLQRPEKPPNRLDGGSRRRRQTADDNLFVMY
LGNKDAFGDYIGMALRSNILHVIYKLSGKEYDIEASSITESSSEVSFFDKIDLYRIYQDA
QVNQTNQFTSINPKPSQLKEYLGELTQNLLDLSPDQVVFYVGGYPDDFTPPDSLNYGKYN
GCIEFSTFNDKFISLYNFKNAVDINLETPCKRQIPLLISDSEYYEGTGYAKVELGKFPSY
LSILQQVETRAKDALLLYLGDEEDDFFYSISLENGYVVMRGQDKTNILEPVMSQDKASLP
PGTDVKVFISAGREFTVRVGKVEVKRTDVIPQMFKHFYIGGIPDSLRERYNISTPALKGC
VKIGTAATLTPNVLEKVGVGKGCTKELQMLRKAEFGLGGALEKLYEDFSLDSVSLSLGFR
STEPDGILLQNSKNSKDMEISMESGYVLLRFQKSVWKSTKQYQDGKWHYLTVFNQGQNIE
LRINEDDLGKMVTGSSSGPYSSSVILGKDTFKGCISNLYLRRPDSLYRVEDLGAYSSTGD
VLLNTCSATRSI
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcagtcgcgtgcagcagcgggacgctgagggccctcgcgctcggggccctg
ctgggactggtttatggaggacccagacccgagaacagaagagagcacgccgagtggacg
cagagagttcagtatcccgcggtggacgacgctcagcgcgtcatgtttccatcggtggac
gacccacagagatgtgctgctggtttctatctggacagaagcggtgcgtttgctcgttgt
gttcgctgctcctgtaacggtttctctgatgagtgtgaggagaacaccggccggtgtctg
aagtgcagtgataatacagcaggagatcactgtgagcgctgcagagacggatattactca
cacgctgctcagaggagatgcagcgcctgcccatgtcccttcagcaacctcgccaacaat
tttgctctgggctgcactcaaagcgatggcagacttctgtgtctgtgtaaagacggttac
accggcgaaagatgtgagcgatgtgctccgggatattacggcgatcctctggtctccggt
ggacgctgtcgtctgtgcagctgtcctggaaacctgtgtgactctaacactggagtgtgc
aggaactctctggagctccaggacacaaacacagaggagcgttgtgaagagtgtgataac
tgtgcacagaaactgctgaacgatctggaaaagtttgatgctgagctcagaagaattaaa
gatcagctggatgtcgactctctcagaccttcatctaaagagcatctgaggaagcttgaa
gaagccattactgccacaagggatctggtgaacacgttcagcttcaccgtcgacagccag
gtgcctaaaattaaccagctggagcaagatgttatcagtgtgaccaacgatatggacaag
ctgaaagaacaggtcagaaagcaatctgaggatgcacagaaggctctttctaacgctgaa
aacagccaccaaagagcaaaagatctggacaccgagacacagaacctcctcagaaaaata
caggagctcctgaagcagctgatggactccgagagcagtggatccactctgcctcacgct
gatttagccaaactcctggagcaggctcagagcatggtgaaggagatgcagaagagaagc
ttcacgccgcagaaggacgcagctaagacagagcaagctgaagctaacaaatttctggag
gatgttagaaacatcacaaagcggtgcgatgagaacgaggcggcgtcgaagcgtgtggac
agtctgctgagcagctacgaggacaaactcaaagcgctggaggatttgctcaaacaggcg
ggggatacgctgaagaacgccagcggtcagaacgacatcaacgcagaaggcctccgagac
attctgaagcgagtgaaggatctggagcgtgagagagaccgcgtacaggatcagatcgct
cttgcagtcaaacatctgaaggacactgaagacgctctgaatatgttcaatgacagcaga
acggaatacgagaagctcgcggcgcagctcaacagatcaaagactgaactcgaggacaga
gtccaaatcctctcacaagcagcagccaaagagaagatcgtgaaacaggcagaagaacat
gcagaaaacatgcacagactggccaaagagctgcaagaggctgtacagaatgtgagtggg
cgctctggtgtgcagaccgctctctctgggatagaggcgtacaaaaacatcaccgacgcc
gtcaacgctgcagaggagatggcgaagagggccaaagaggcggctgacaaagcactcaat
gacgtcattgaaggggacttattcaacagagcaatagatctgaaaaacgatagcaataac
ctccttgaagatgccaaaactgctactaaagatcttgaaggagcaacgaaagacctcaaa
aatcagaagaaacgcttgcaagctgcagaaaagaagaaggaggcactgggaaaggatctg
ctcgcggttcaggagggtttgaaggggattcagagagatgatattggtaagattatcgac
gcggctaagaaaacggcagcggcggccattcgctccacgaatgacacaatggaccagcta
aacaacatcagagcagaagttaccaatatctccattactcctactctccctaacatggac
agggctctcaataatgtcgaaatgaccatcagaaacctgagcggctccatcccgtccctg
ctggataaaatagatgagataaattctgagttaagcaccgggaacaacgtgactgataat
attaaaaagataaaggagctgatcgagcaagcgcgagaagctgctaacagagttgttgtg
ccgatgaaattcacggggaaagggtacgtagagctgcgtcctccacaggatttggacgac
ctgcgggcgtacaccgctctcagcctgtcgctccagagacccgagaaaccccccaatcgg
ctcgatgggggcagccgccggcggcggcagacagctgatgacaatctgtttgtgatgtac
ctcggaaacaaggacgcattcggagactacatcggcatggctcttcgcagtaacatcctg
cacgtcatctataagctcagtggaaaggagtatgatatcgaggcgtccagcatcaccgag
tcctcatctgaagtgtctttcttcgacaaaattgacctttacagaatttatcaagatgca
caagtcaatcaaacaaatcaattcacgtcaattaatccgaagccttcacagctgaaggaa
tacttgggtgaactgacacaaaacctgctggacctcagcccagatcaagtggtcttctat
gtcggaggatatccagatgacttcactccaccagactctctcaactacggcaaatacaac
ggctgcattgagttttccaccttcaatgacaaattcatcagtctgtacaactttaagaac
gcggttgatattaacttagaaaccccttgcaagagacaaatcccactgttgatctcagac
tcagaatactatgaaggcaccggttacgccaaagtcgagcttggaaaattccccagttat
ctgtcgatcttacagcaagtggaaacgagagctaaggatgctcttctgctgtatttagga
gacgaggaggatgactttttctacagcatctctcttgagaacggctacgtcgttatgcgt
ggccaagacaaaactaatattttggagcccgtcatgagtcaagataaagcaagccttcct
ccgggaacagatgtgaaagttttcatttctgcaggaagagagtttacagtccgagtaggg
aaggtggaggtcaaaaggacggacgtcattccacaaatgttcaagcacttctacatcggc
gggattcccgactctttgcgtgagagatacaacatcagtaccccggctctgaaaggctgt
gtgaagatcggcacagcggccaccctcaccccaaacgtcctggagaaagtgggagtcgga
aaaggctgcactaaagagctgcagatgttgaggaaagcggagttcggcctcggcggtgca
ctggagaaactctatgaagacttcagcttagacagcgtcagtctttctctgggcttcagg
agcacagaaccagacggcatcctgctgcagaacagcaaaaacagtaaagacatggagatc
tccatggagagcggatatgtgctcctcagattccagaagagcgtctggaaatctactaag
cagtaccaggatgggaaatggcattatctcactgttttcaatcagggccaaaacattgaa
ttgcgcatcaatgaagatgatcttggcaagatggtgacagggtcttcatctggaccgtat
tcttccagcgtgatcctgggcaaagacaccttcaagggctgcatctccaacctgtatctg
aggagacctgattctctttacagagtggaagatctgggcgcttactcttccacaggagac
gtgttgttgaacacatgcagtgccacacgcagtatctag
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