Carassius gibelio (silver crucian carp): 127950803
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Entry
127950803 CDS
T08819
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127950803
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127950803
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
127950803
NCBI-ProteinID:
XP_052404071
LinkDB
All DBs
Position
B2:1861826..1872372
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AA seq
461 aa
AA seq
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MNLDGDSSMSVSCGNGKLRQWLIDQIDSGDYPGLVWENDEKTIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGLDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPYKVYR
IIPEGAKRGSKSSSMDDGAGHMTSISYPVHSSYPPLQPQMPGYMLPQERRDWREYSGDQP
HPQAPHAELPYGQCPYPPTRSLSWHPSACDNGYQISGSFYTYSPTETHPVAMDPNMRSAE
AMALSDCRLHVSLYYRESLVKEVTTSSPEGCRISSSPSPGSPSSPSSPGPEERLYGGAEP
VLLPFPYPQSQRRGAEKLPNVLERGVLLWLAPDGLYAKRLCQGRVYWEGPLAPYADKPNK
LEKEQTCKLMDTQQFLSELQGFIHHGRPMPRSQVVLCFGDEFPDPQRQSKMITAQVEPMF
ARQLLYFAGQTNGHYLRGYELQSQGALPVEEYQRSMQHLQE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagatggggacagcagcatgtcagtcagttgtgggaatggcaaacttagacag
tggctcatcgatcagattgacagcggggactatcccggcttggtttgggaaaatgacgag
aaaaccattttcaggattccctggaagcacgcggggaaacaggactacaaccgggacgag
gacgccgcgctgttcaaggcttgggctctgttcaaaggcaagtacagagaaggcttggac
aaaccagaccctccaacatggaagaccaggctccgctgtgccctgaacaaaagcaatgac
ttcgatgaactggtggagagaagccagctggacatctcagatccttacaaggtctacagg
ataataccagaaggagccaagagaggctctaagtccagcagtatggatgacggcgcagga
cacatgacttctattagttatccagtgcattcttcttatcctcctctacagcctcagatg
ccgggatacatgctgccgcaggagagacgagactggagggaatacagcggcgatcagcct
catcctcaggctcctcacgcagagttaccgtacggccagtgtccgtatccacccacacgc
tccctgtcctggcacccatccgcctgtgacaacggatatcagatatctggctccttctac
acgtattcgcctacagaaacccatccagtggcaatggaccccaatatgagatcggccgaa
gccatggcactatcagactgccgtctgcacgtgtctctgtattaccgtgagtctctggtg
aaggaggtgaccaccagcagccctgaaggctgtcgcatctcctcctctccgtctccagga
tccccctcgtccccgtcctctccgggccccgaggagcgtctgtacggcggggccgagccc
gtgctcttgcccttcccgtaccctcagtctcagcggcgcggggccgagaagctgccgaac
gtgctggagcggggcgtgctgctgtggctggctccggacgggctctacgccaagcgtctg
tgtcaggggagggtgtactgggagggtcctctggccccctacgccgacaaacccaacaaa
ctggagaaagagcagacctgcaaactgatggacacgcagcagttcctctcagaactgcag
ggcttcattcaccacggccgtcccatgcctcgctctcaggtggtgctgtgcttcggagac
gagtttccagaccctcaacggcagagcaaaatgatcacagctcaggtggagcccatgttt
gcacggcagctcctgtattttgccggccagaccaacggtcactacctgcgcggatatgag
cttcagagtcaaggtgctttacctgtggaagagtatcagagaagcatgcagcacttgcag
gagtaa
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