KEGG   Carassius gibelio (silver crucian carp): 127950820
Entry
127950820         CDS       T08819                                 
Name
(RefSeq) coatomer subunit beta' isoform X1
  KO
K17302  coatomer subunit beta'
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127950820
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127950820
Membrane trafficking [BR:cgib04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    127950820
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   127950820
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 127950820
NCBI-ProteinID: XP_052404096
LinkDB
Position
B2:complement(23515742..23524395)
AA seq 946 aa
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVITGADDMQIRAFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSANGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQESNEGITEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLREAFVAEQYLRETCLGQTRPASDYPLVTPNEERNVLEEA
SGYEPKGIIPTPTQQVKDTEEAPEDVGVLASVTAAVSPPVVAEVPTMSHAESQPAQKVEE
KTQKEPPKTTAAEQKVIDDLEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgcctctgaggctggacatcaagcgcaaactcacggctcgatctgaccgtgtcaaaagc
gtagaccttcatccgtccgagccatggatgctggccagtctatacaacggcagtgtctgt
gtgtggaaccatgaaacacagactctggttaagacttttgaagtctgcgaccttccagta
agagccgccaaatttgttgccaggaaaaattgggtcattactggtgctgatgacatgcaa
attcgggctttcaactataacacactagagcgagtacacatgtttgaggcccattcagat
tacattcgctgcatcgctgttcatcccacccagccctacatcctcacaagcagtgatgac
atgttgataaagctctgggactgggagaagaaatggtcctgcagtcaggtgtttgagggc
cacacacactacgtcatgcagattgtcatcaaccctaaagacaacaaccagtttgcgagt
gcatcgctggatagaactatcaaggtttggcagctgggctcttcctctcctaacttcact
ctggagggccatgataagggggtgaactgcattgattattacagtggaggagataaaccc
tacctcatatcaggagctgatgacagactggtcaagatttgggactatcagaataagacg
tgtgtgcagacgctcgagggtcacgctcagaatgtgtcctgtgtaaacttccacccagag
ctgccgatcatcatcactggatcagaggacggcacggttcggatctggcactccagcact
tatcgtctggagagcaccctgaactatggtatggagcgggtgtggtgtgtgtctggcttg
cgtggctccaacaatgtggcattgggctatgatgaaggcagcatcattatcaagcttggt
cgtgaggagccagccatgtcaatggacaccagtggaaaaatcatttgggccaagcactcc
gagattcagcaggctaacctcaaagccatgggagatgctgagatcaaggatggtgagagg
ctgccactggcagtgaaagacatgggcagctgtgagatctaccctcaaaccatccagcac
aatcctaatggaaggtttgtggtggtgtgtggagatggagagtacatcatctacactgcc
atggctctgagaaataagagctttggatctgcacaggagtttgtctgggcccatgattca
tcggagtacgcgatacgggaaagcagcagtgtggttaagatcttcaaaaattttaaggag
aaaaaatcttttaagccagactttggagcagaaggcatctatggtggtttcctgctgggt
gtccgatcagcgaatggcttggctttctatgactgggataacacagagctgattcgccgc
attgagatccagcccaaacacattttctggtcagactccggagagctggtgtgtattgcc
accgaggagtctttcttcatcctgcgctatctgtcggagaaggtggctgcctcacaggag
tcaaatgaggggataactgaagacggtattgaagatgcttttgaggtccagggagagatt
caggaagtggtaaagactggtctgtgggtgggagactgtttcatttacaccagctctgtc
aacagactcaactactttgttggaggagagattgtcacaattgctcacctggacagaact
atgtaccttctgggttacattccaaaagacgaccgtctttacctgggtgataaggagctg
aacatagtgagtttctctcttctggtgtctgtcctggagtaccagactgccgtcatgcgc
agagactttggcatggcagacaaagtgctgcccaccattccgaaagaacagagaaccaga
gttgcccacttcctggaaaaacagggtttcaagcagcaggctctggccgtgtcctctgat
ccagagcaccggttcgagctggcgctacagttaggagagctgaaaattgcttatcagcta
gcagtagaagctgagtcggagcagaagtggaagcagttggcagagttggccatcagtaag
tgccagtttagtttggcacaggagtgcctccatcatgcccaggactatggaggactgctg
ctgctggccacagcatctggcaacgccactatggttgccaaacttgcagagggggcagag
cgtgacggcaaaaacaatgttgccttcatgacctacttcctgcagggaaaactggacaac
tgtttggagcttctgatcaagacaaatcgtctgccagaagcagcctttcttgcccgcaca
tatctacccagccaagtatccagggtggtgaagctttggagagagagtttgtctaaagta
aatcagaaagcagcagagtctctggcagaccccacagagtatgagaacttattcccaggt
ctgagagaggcctttgtggcagagcagtacctgagagagacctgcctcggccaaacaaga
cctgcctcagactacccactggtcacgcccaatgaagaaagaaatgtgttggaagaggcc
agtggttacgaacccaaaggaattatccccactcccacgcagcaggtgaaggacacagag
gaggccccagaggatgtgggtgttttggcctcggtgacggcagccgtctcgcctccagta
gttgcagaagtgcctactatgagtcatgcagaatcccagcctgctcagaaggttgaggag
aagacacaaaaagagcctcccaagacaacagcagcagaacagaaggttatcgatgatctg
gaggatgatttggataacatggagcttgatgacattgacaccacagacgtcaatctggat
gacgacttcttagatgactaa

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