Carassius gibelio (silver crucian carp): 127950913 Help Entry 127950913         CDS       T08819                                  Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cgib  Carassius gibelio (silver crucian carp) Brite KEGG Orthology (KO) [BR:cgib00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cgib03000]     127950913    04121 Ubiquitin system [BR:cgib04121]     127950913 Transcription factors [BR:cgib03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     127950913 Ubiquitin system [BR:cgib04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     127950913 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 FYVE NS3_helicase_C DUF2570 Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  127950913 NCBI-ProteinID:  XP_052404290 LinkDB All DBs Position B2:complement(6005548..6025756) Genome browser AA seq 1105 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAINTD IEQLPVNSALLQLVGGQVSKQQPVALITCPEDTNHYDEARQCVEELALYLKPLSSARGVG LSNAAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADTQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARVPCTPGLLPEDVVPLEPGRKASMH TNGGPLPQLISRGTDPSTYDLLLKPKMDATSLSAPGSPPDSLDKCSLALTPHPVPHPRAE HLPMPKQVPVMPRGAPQMYPQQQPQLFYPEPARPPPSGSQYDAQYPTGNPYPYQPPQYVP PRYIRNPPPPGESPYPETYPGYGPDRQYPSHHSGAPFSAHTYAQPSHYSRRHGHYPAPPP PFAPTRDDLVRMSPVPLDVPPSAMPPPPAGPAGSLYHSQEPSSRDRYPPDGYYTAGPHPS QMRSHIGQDPYSRSQPSLDDLHRRRKELLVQLEERKVISPPPFAASPTLPSHPFPNDYPR EYLEDGSKAFGSREPDYAGQYSPWSCDTIGSYIGSKDTKPKDVSSSVEMMNAEGKVLREP PLDTQRRSAEAKDDDPIIPFGPLPTVSPFGAISRTSKTGYQTTGPVQAIASSQASGSKHM TMTADYPYGNHSGWGGASYPQHQSINSQGHFSERLPVSAPDREQLKIELQQVNQQISQQT RGMEAVSNSVLLQREACALASQPTAAVKWSSGGTVSSEQLSLELDHVELEIKKRTREIAI ENQVAHEYKLKATENGQPDHKAQLEELSLALGEVSNGSSGMKPASSMGGSMLSLTNKTSS LALCSADQAASSSDLQKNGVVHSCS NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacagaatttttactgtgccccatatgcacccagacg ttcgaggagacggtgcgccggcccatcagtttgggttgcggccacaccgtttgcaagatg tgcctcaacaaactgcaccgcaaggcttgtccctttgaccagacggccatcaatactgac atcgagcagctgcccgtcaactcagcccttttacagctggtcgggggtcaggtgtccaaa cagcaacctgtggcgctcattacatgtccagaggacaccaatcattatgatgaggcacgg cagtgtgttgaggagctggccctctacctcaaacccctcagcagtgcacgaggagtgggg ttgagtaatgctgctcagagcatgctgagccgccccatgcagaggaagctggtgactctg gtgcactgtcagctggtggaagaggaaggacgggtcagggcaatgcgggcggcccgttct ctgggcgaaagaactgttactgagctcattttgcagcaccaaaacccccagcagctctcc tccaacctgtgggctgctgtcagagccagaggatgccagttcctgggccccgccatgcag gaggaggcactaaagctggtgctgttggccttggaagatggatccgctctttccaggaag gttttggtcctctttgtggtccagagactagaaccaagatttcctcaggcctccaaaacc agtattggacatgtagttcagctcctctaccgtgcctcgtgcttcaaggtgactaagcga gatgaggattcatcactaatgcagttgaaagaggagttccgcacgtatgaggcacttcgg agggaacacgactctcagatcgttcaaatcgcaatggagggaggcctccgcatcgcgccc gatcagtggtcttctctgctgtatggagaccagtctcataagtctcacatgcagtccatc attgacaagctgcagaccccggcgtcgtttgctcagagtgtgcaggagctgaccatcgca ctgcagaggacgggtgaccctgccaatctcaaccgactgagacctcacctcgagctgctt gctaacatcgaccccagtccagatgcacctcctcctacctgggagcagttggagaagggg ctggtggcggtaaagacggtggtgcacggcctagtggacttcattcagaaccacagcaag aagggtgccgacacgcagcagccaccgcagcacagcaaatacaagacgtacatgtgcaga gacatgaagcagaaaggaggctgtcccagaggagccagctgtaccttcgcccattctcag gaggagctggaaaagtaccgtaaaatgaacaaacgtcttgctgcacgagtgccctgcacc cctggtctgctgcctgaggatgtggtcccgctggagcctgggcgaaaggcctctatgcat accaatgggggccctcttccccagctcatctccagaggcacagacccctccacatatgac ctcttactcaagcccaagatggacgccactagcctgagtgctcctgggtcgccacctgac tctttggataaatgtagcttggccctgacaccccaccctgtgcctcaccccagggcggag cacttacccatgcccaagcaggttccagtcatgcccagaggtgcgccacagatgtatcca caacagcagccccagctcttctatccagagcccgccagacctcctccctcaggatctcag tatgatgctcagtacccaacaggcaacccctacccataccaacctccacagtatgtccct ccccgctacatccgtaatccgccacctccgggtgagtccccttacccagagacataccca ggatacggcccagatcgccaatatccgagccaccactctggtgcccctttctcagcccac acatacgcacagccctcacattacagtcgcagacacggacactatccagcacccccacct ccgtttgccccaaccagagacgacttggtcaggatgagcccagttcctttggacgttccc ccgtccgctatgcctccacctccagcagggcctgcaggttctctgtaccactcccaggaa ccgtcatccagagaccgatacccaccggacgggtactacacagctggaccacaccccagc caaatgaggtcccacataggacaggacccttacagccgctctcagcccagtctggatgac ttgcatcgcaggcgcaaagagctgcttgtccagctagaggagagaaaagtcatctctcct ccccccttcgccgcctccccgactctcccttcacacccgttccccaacgactaccctcgg gagtatttggaagacggctctaaagcctttggcagtcgggagccagactacgctgggcag tattccccctggtcatgtgacaccataggatcatacattggctccaaggatactaaacca aaagatgtcagcagttctgtggagatgatgaatgcagaggggaaagttctccgtgaacct ccactggacactcagcggcgctctgcggaagccaaagacgacgatcccatcattcccttt ggtcctctgcccacggtgtctccttttggtgccatttcacgtacctctaaaactggttac cagaccactgggcctgtacaggccatagcatcctcacaggcctcgggctccaaacacatg accatgacagcagactatccgtatggaaaccacagcggatggggcggagcgtcgtaccct cagcaccagagcatcaactctcagggacacttcagcgagcgtctgcccgtgtctgcccct gaccgcgagcagctcaagattgagctccagcaagtcaaccaacagatcagtcagcaaacc cgcggcatggaggctgtcagtaactctgtgctcttgcagagggaggcgtgtgcgctggcg tctcagcccacggctgcagtgaagtggtcttcaggtggcactgtgtccagtgagcagctc agcctggagcttgatcacgtagagctggagatcaagaagagaacccgtgaaatcgccatt gagaatcaggtggcccatgaatacaagctgaaggccactgagaatgggcagcctgatcat aaagcccagctggaggaactctctttagcattgggtgaggtgtctaatggatccagtggc atgaagccagccagtagtatgggaggatctatgctgtcgcttaccaataagacatcttct ctcgccctctgctccgccgaccaagcagcgagtagttcagaccttcagaagaacggtgtt gttcactcttgctcttaa

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