Carassius gibelio (silver crucian carp): 127950935
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Entry
127950935 CDS
T08819
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127950935
03036 Chromosome and associated proteins [BR:
cgib03036
]
127950935
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127950935
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127950935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127950935
NCBI-ProteinID:
XP_052404331
LinkDB
All DBs
Position
A3:19250916..19282911
Genome browser
AA seq
1775 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHTGLEPQYENSPWSSSSPCGDSNSNWGKVIVDKGPWPSITGS
DPELASECMDADSASSSGSEKNLSMMTSRSTGGDNNGNRQGSHFMVANGSNNVGNGSIKG
PWCVSNGSMLSTCQGSIEDSSSKLAESSHGKINAWGTQGSSNNIGINPSTLNPNANHGAW
PVLQNTGPNPHGPVGNGNGGTNTQQSTIGQTPSMQSINSKMSWGCLQENMSEAEVNGTNK
VPSGQPQNLNTEFNGPNNTTNTMTSSLPNSTGSIQMNEQPPGHRAWPMSTGCSPQLPISP
VSNGTSISQHGNSEGINSGSYGTAWGISPSTNYSGDKCPIPKGQAVGDTVNATLMQSGAN
SSSVSAASLKNNNNNGMSGHGGGWDSAPATSQSMSWGAGNGVGPAGIPHPWGSASSSSSS
SSSSSNTGTKVSNGEWNTLPSNSQHSNDSTNGSKKGTNGWKSLEDDALGIGSSGQPSQVS
TWNKSTGSEGSGESSGGHSERDGQRGGNRRRGNQQGMINAALSRIDVDPRVLSNTGWGQT
PVRQNTAWDVSSSDKKTGNGQTGWGSAPPQASNSGGWGDGPSTNKSSNSSVSGWSESKPS
TGWGETKGPAGQNGWEDSPSVTLSKGSSSWNGSKDEKTSWNSAPKAKQGWCGEGPKGNHW
VEPQKSGSGGWDSDSDRSGSGWNEPGQCGTSNTWGGSGGTNTPDQSGPTTGWGEPPKTNN
QNQTWGEPIKPSHSNPTWVDNSKPNKSSEWGKSQDSSMGMFRSGNNSQTGAPCQNKPSGW
LGGPVPAASKEEESTGWEEPSPESIRRRMEIDDGTSAWGDPTKYKCSNVNTWNNNTAGEQ
DGMAVSQPPQAQSSMAPKEKNCSSGWGEPYGGPQKMESSTWGEHAAPPVTVDNGTSAWGK
PVNTGSSWEEPGRKTSVGSSWGHAAVGQQSQHKSGSKPMQDNWGGEETSMTGHSNWEEEK
ELEMGMWNNNLSQEMNQHGNWSYKKVPPKLNKGPNKQDDSQWMNPLVKQLTNMYPRDSAE
DSLKSNKMDMSGGMTDKRIDVDKHVFNIGEYGKNTASRHQIHKDSPIDRNSYMDKNVNMY
GVGNAAAQGRNAQQPPAQALNSAQPGLRNQVPPQLLPSQVPPSLLKYSPNNGGLNPLFGP
QQVAVLNQLSQLNQLSQLSQINQLQRLLLQQKAQSQRAMPVNSRQQQEQGRGLGPSQQMM
QSSRHLDPSLMKQQTSPQPPSLHQPSLKSCMENFMPLNASDLQKEQSSLSSFSNFPLGGC
PPHLNVGQTDSLLHQAAKPNSMFASDMSGCQSAGISQSHSLLAPPLSNGHMVPGSPINPR
VGKNFYPDSSSLPARALNSNLNVSNLDIGSVGFKEPQSRLKKWTAMDISVNSPLDQNPSK
SGAITSGLRLEDSPFGPYDFINAGNAPISPPGSVGDGWPSRAKSPHGSTNVNWPPEFRPG
EPWKGYPNIDPETDPFVTPGSVINNLSINTVRDVDHLRDRNNGPSSSLNTTLPSNSAWTS
IRASNHNSSLSSTAQSTSARNSDSKWSPGTVTNTSLAHELWKVPLPSKGISAPSRPPPGL
TGQKQPSSWDNSSLRLAGWGSSDSRFNSGSSWGDSSSGRTNWLVLKNLTPQIDGSTLRTL
CMQHGPLITFHLNLPHGNAVVCYSSKDEAAKAQKSLHMCVLGNTTILAEFASEEEINRFF
AQGQSMTASPNWQTLSSSQNRIGSIEGSHPFPNRTDPNHWNGNGDLHGSSLWGIPNYSTS
LWGSPSGGEGGGINSPSPISSFLPVDHLTGGGDSM
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattccgtcagccactcccctaaccaaacaggtttggaacatact
ggtctggagccacagtatgagaattcaccatggagctctagctcaccttgtggtgactcg
aacagcaactggggaaaagttattgtagataagggaccctggccctccatcactggtagt
gacccagagttagcctcagaatgtatggatgctgactctgcctccagctctgggtcagaa
aaaaatcttagtatgatgacgtctaggagcactggtggagacaacaatggcaatagacaa
ggctctcatttcatggttgcaaatggcagcaataatgtgggtaatgggagtattaagggg
ccttggtgtgtatccaatggctcgatgctaagcacatgtcaaggctccattgaggactcc
agcagcaagctggcagaaagcagccatggcaaaataaatgcatggggtacccaaggttcc
tcaaacaatataggtataaatccaagcactttgaacccaaatgccaaccatggtgcctgg
cccgttcttcagaacactggacccaacccccatgggcctgtgggaaatggaaatggtggc
accaacactcaacaaagcaccataggtcaaacacccagcatgcagagtatcaactctaag
atgtcctggggatgcttgcaggaaaatatgtctgaagctgaagtcaatggtacaaacaag
gttccaagtgggcagcctcaaaaccttaacactgaatttaatggaccaaataacactact
aacacgatgacctctagtttaccaaactctacaggttcaatccagatgaatgaacagccc
ccagggcacagagcttggcctatgagtacagggtgctcccctcagctccctatttctcca
gtctctaatggcacttccatttctcaacatggcaacagtgagggaattaacagcgggtct
tatggtacagcatggggcatttcgcccagcactaattactctggagacaaatgtcctatc
ccaaaaggccaagctgtgggcgacactgtgaatgcaactctaatgcagtctggagccaac
agctcctctgtgagtgctgcttctttaaagaataataataataacgggatgagcggtcat
ggaggaggttgggactcagcacccgctacctcacaaagtatgtcttggggagcaggtaat
ggtgtgggcccagctgggatccctcacccctgggggagtgcctcctcctcctcttcctct
tcctcatcctcttcaaacactggcactaaggtctcaaatggggagtggaacactttgccc
agcaacagtcagcattccaatgatagtacgaatggaagcaagaagggaacaaatggatgg
aagtcattggaggatgatgctcttggtattgggagctctggtcaaccgtcacaagtcagc
acatggaacaagtctacaggcagtgaaggaagtggagagagctcaggaggtcatagtgag
agggatgggcaacgtgggggcaaccgaaggaggggtaatcagcagggcatgatcaatgca
gctctctctagaattgacgtggaccccagggtgttatccaacacagggtggggacaaact
ccagtccgccagaacactgcatgggatgtttcaagctctgataaaaagacaggaaatgga
cagacaggctggggtagtgctccccctcaggcatctaactcaggtggttggggagatgga
cccagcaccaacaaaagtagcaattcttcagtatctgggtggtctgaatcaaaaccttca
actggctggggagaaaccaaaggtccagctgggcagaatgggtgggaggattccccgtct
gttacattgagcaagggtagttcctcatggaatggtagcaaggatgagaagacctcctgg
aatagtgcaccaaaggcaaagcagggatggtgcggagaaggcccaaagggaaaccattgg
gtggagccccagaagtctggttcaggtggctgggatagtgacagcgaccgctctggatca
ggctggaatgagcctgggcagtgtggtacaagcaacacttggggaggcagtggaggcacc
aacactcctgaccagagtggtccaaccacaggatggggagagccacccaagaccaacaat
caaaaccaaacctggggtgagccaatcaaacccagccactccaaccccacctgggttgac
aattcaaaaccgaacaagtcttcagagtggggcaagtctcaagattccagcatgggaatg
ttcaggagtgggaacaactctcagactggagccccttgtcagaacaagccttcaggatgg
ctgggaggaccagtgcctgctgcttccaaagaagaagaatccactggatgggaagaacca
tcccctgaatccatcaggcgtagaatggagatcgatgatggtacttcagcatggggagat
cccactaagtataagtgcagtaacgtaaatacatggaacaacaacactgctggagagcag
gatggcatggctgtttctcagcccccacaggcccaaagctctatggctccaaaagaaaag
aactgcagctcagggtggggagaaccatatggtggcccacaaaaaatggagtcctctacc
tggggtgagcatgctgctccacctgtcactgtggacaatggcacatctgcttggggaaag
cctgttaatacaggttccagctgggaagagccgggaaggaaaacctcagtaggcagtagc
tggggtcacgctgctgtaggacaacaatcacaacacaagtctggatccaaacctatgcaa
gataactggggtggagaggagacgtccatgacagggcactccaactgggaggaggaaaag
gaattagagatgggcatgtggaacaacaatctatcacaggaaatgaaccaacatggaaac
tggtcctacaagaaggtgcctccaaagcttaacaaaggacccaataagcaagatgattct
cagtggatgaatccgcttgtgaaacagctcaccaacatgtaccctagggattccgctgaa
gattccctgaagagcaataagatggatatgtctggaggaatgacagacaagcgcattgat
gttgacaagcatgtttttaacatcggagagtacgggaaaaatactgcttcacgccaccag
atccacaaagactctcctatagaccgtaactcctatatggataagaatgtaaatatgtac
ggtgttggtaatgcagcagcacaaggccggaatgcacagcagcctccagcacaagctctg
aactctgctcagcccggtctacgcaaccaagtgcctcctcaactacttccctctcaggtc
ccaccatccctgttgaagtactctcccaataatgggggtctgaaccctctgtttggccca
cagcaggtggctgtgctgaaccagctgtcccagctcaaccaactgtctcagctttctcag
attaatcagttacagcgtctccttttgcagcaaaaagcgcaaagccagagagccatgcct
gttaacagccgccagcaacaggaacagggtcgtggtctgggtccgtcccagcagatgatg
cagagttcccgccatctcgatccttctttgatgaagcagcagacttcccctcagccaccc
tcgctgcaccagcccagcctcaagtcctgcatggagaacttcatgcccctcaatgcctct
gacctgcagaaggaacaaagttccttgagctcgttcagtaatttccctttaggtgggtgc
cctccccatcttaatgtaggccagacagactctttgttgcaccaagctgccaagcccaac
tcgatgtttgcctctgacatgtcaggctgtcagtcagctggcattagtcaaagtcatagc
ctcctagccccacctctgagcaatggccacatggtgccaggctctcccatcaaccctcgg
gtaggaaagaacttctaccctgacagcagctctcttccagcaagagctttgaactcaaac
ttgaatgtaagcaaccttgacattggcagtgttggttttaaggagccacagtcccgtctg
aagaagtggactgccatggacatttccgttaactcgccacttgatcaaaaccccagcaaa
tctggtgctataacatctggcctgaggcttgaagactcgccctttggtccatatgacttc
atcaatgccggtaacgctcccatcagtcctcctggctctgtgggagatggctggcccagc
cgtgccaaatcacctcatggttccactaatgtcaactggccaccagagttccgtcctggt
gagccctggaaaggatatccgaacattgatcctgaaactgacccatttgtcactcctggc
agtgtgattaataatctctccattaatacagtgcgggatgttgatcacctcagggacagg
aacaatgggccatcctcatcacttaacaccacgctgccttcaaatagtgcctggacatcc
attcgtgcctccaaccacaatagttccctcagcagtacagcacaaagcacttcagccaga
aacagtgactccaaatggtctcctggcacagtcaccaacacctctttggctcacgagctg
tggaaggttcctctcccctcaaaaggtatctctgctccgtcccgccccccgccgggcctg
actggccagaaacagccctcatcttgggacaacagttctctgagactggcaggctggggt
agctctgactccagattcaactctggttccagctggggtgacagcagctcagggagaact
aattggcttgttctcaaaaacctcacacctcagattgatggctccaccttgcgaactctg
tgcatgcagcacggtccactgatcacattccatctgaaccttccccatggcaatgctgtc
gtctgctacagctctaaggacgaggcagcaaaagcccagaagtcactgcacatgtgcgta
ttagggaacactactattcttgcagagtttgctagcgaagaggaaattaatcgtttcttt
gcacaaggtcagtcaatgactgcctctcccaactggcagacgctgagctcttctcagaac
cggatcggatccatcgagggttctcaccccttcccaaaccgcactgatccaaatcactgg
aacggcaatggagacctgcacggctcgtctctctggggcattcccaattactccacgagc
ctgtgggggagccccagtggtggtgagggtgggggaatcaacagtccctcccccatcagc
tccttccttcctgttgaccacctgacgggaggcggggattccatgtag
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integrated database retrieval system
