Carassius gibelio (silver crucian carp): 127950960
Help
Entry
127950960 CDS
T08819
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127950960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127950960
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127950960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127950960
NCBI-ProteinID:
XP_052404388
LinkDB
All DBs
Position
B2:20415615..20463256
Genome browser
AA seq
648 aa
AA seq
DB search
MSRRYLLGFTMDSTKNGAVPGEPVKKDENSRRGNWGNQIEFVLTSVGYAVGLGNVWRFPY
LCYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFTSLGCLGVWKVSPMFKGVGYGMMVV
STYIGIYYNVVICIAFYYFFMSMTNLLPWTYCNNPWNTPDCTGVLSTPRANASFANVSAV
LSGVTEIVNRTKRTSPSEEYWRNYVLNISDGIGNFGEVRLPILGCLAVSWIVVFLCLIRG
VKSSGKVVYFTATFPYVVLTILFIRGITLEGAVSGIKYYLTPQWEKILDAKVWGDAASQI
FYSLGCAWGGLITMASYNKFHNNCFRDSIIISVTNCATSVYAGFVIFSILGFMAHHLGVD
VSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAVVDEI
GTDWIIKNKTYITLGVAIIGFLLGVPLTTQAGIYWLLLMDNYAASFSLVVISCIMCICIM
YVYGHKNYFRDVEMMLGFPPPIFFRICWRFVSPFIITFILIFTVIQYKPITYNDYVYPSW
SLVIGFAMALSSVICIPIYALFKIAMSEGSTFLERLKNSVKPDPDWGPALQEHRKGRYAT
TGPESVEVCPLKEDLKDEGKEKLKEKEDEIGLTIPGSNGSTLNPSPSA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacgttacttgctggggtttacaatggacagcacaaagaatggagcggttcca
ggagagccagtaaagaaagatgaaaactccagaagggggaactggggcaaccagattgag
tttgtcctcaccagtgttggctacgcagtgggcctgggaaacgtctggaggtttccttac
ctctgctacaggaatggaggaggtgccttcatgttcccatacttcatcatgctggtgttt
tgtggcatccctctgttcttcctggagctctcctttgggcagttcacctccctcgggtgc
ttgggagtctggaaggtcagccccatgtttaaaggtgtgggctatggaatgatggtggtc
tcgacctatattgggatttactacaatgtggtgatttgcattgcattttattacttcttc
atgtccatgacaaacctgctgccctggacgtactgtaacaacccctggaacactcctgac
tgcactggagtgttgagcactccacgagctaacgccagcttcgccaatgtgtctgcggtc
ctgtcaggggtgactgagatagtcaaccgcaccaaaagaaccagtcctagtgaagagtac
tggaggaactatgtgctgaatatctctgatggtattgggaacttcggggaggtgcgtcta
cctatcctgggctgtctagctgtgtcatggatagttgtgttcctgtgtctaattcgagga
gtcaagtcatcaggcaaggtggtgtatttcacagcaaccttcccttatgtggtgctgacc
attctcttcatcagaggaatcactctggaaggagccgtcagtggcatcaaatactatttg
acccctcagtgggagaaaattctagatgccaaggtatggggggatgccgcctctcagatt
ttctattcactgggctgtgcctggggtgggcttatcaccatggcatcatataacaagttc
cacaataactgttttagagacagtatcatcatcagtgtaaccaactgtgcgaccagtgtg
tatgctggctttgttatcttctccatcctgggattcatggctcatcatctgggggtggat
gtgtcagaggtggccgatcacgggccaggcctggcgtttgtggcctacccagaggccctg
acattactgcccatatcacctctctggtccctgctgttcttctttatgctcattttattg
ggccttggtactcagttctgtctactggagactctggtgacggctgtagtagatgagatt
ggaactgactggattatcaaaaataaaacctatatcacactgggagtggctataatagga
ttcctcctgggagtgccactgaccacacaggcaggaatatactggttgctgcttatggac
aactacgctgcgagtttctctctggtcgtcatctcttgcattatgtgcatctgtataatg
tatgtctatggccacaagaactactttagagatgtggagatgatgctaggcttccctcct
ccaatcttcttcaggatctgctggagatttgtgtcgcccttcattattacttttattctg
attttcactgtgatacagtacaagcctattacctacaatgactatgtatatcccagctgg
tcattggttattgggtttgccatggctttgtcttcagtcatctgtatacctatctatgct
ctgttcaagattgctatgtctgaaggatccacatttttagagcgtttgaagaactccgtg
aagcctgacccagactggggcccggctctccaggagcaccgcaagggccgatacgccact
acaggccctgagtcagtggaggtgtgccctctcaaagaagacctgaaggatgagggtaaa
gagaaactcaaggagaaagaggatgagatcggtttgaccatcccaggaagcaacggctcc
acattaaacccctcaccaagcgcatag
DBGET
integrated database retrieval system
