KEGG   Carassius gibelio (silver crucian carp): 127951055
Entry
127951055         CDS       T08819                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03271  Virion - Rotavirus
cgib04145  Phagosome
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04514  Cell adhesion molecule (CAM) interaction
cgib04517  IgSF CAM signaling
cgib04518  Integrin signaling
cgib04530  Tight junction
cgib04810  Regulation of actin cytoskeleton
cgib04820  Cytoskeleton in muscle cells
cgib05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    127951055
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127951055
   04514 Cell adhesion molecule (CAM) interaction
    127951055
   04517 IgSF CAM signaling
    127951055
   04518 Integrin signaling
    127951055
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127951055
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127951055
   04530 Tight junction
    127951055
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127951055
   04810 Regulation of actin cytoskeleton
    127951055
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    127951055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127951055
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127951055
   04515 Cell adhesion molecules [BR:cgib04515]
    127951055
   04090 CD molecules [BR:cgib04090]
    127951055
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    127951055
Exosome [BR:cgib04147]
 Exosomal proteins
  Proteins found in most exosomes
   127951055
Cell adhesion molecules [BR:cgib04515]
 Integrins
  Integrin beta subunits
   127951055
CD molecules [BR:cgib04090]
 Proteins
  127951055
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 127951055
NCBI-ProteinID: XP_052404631
LinkDB
Position
B2:25614832..25667516
AA seq 811 aa
MDVRLLLISVLLGLSRAQLDGNECTKASAQSCGECIQVGEKCGWCTDENFLKQGEQKSTR
CDEIEALIKKGCNKSSIENPRGNVTVSKNQSLTEHTNSTKDGAKLKPDQITQIQPQKLTL
DLRSGEAQKFVLTFRRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTKLMTEMQKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTSDGSQFNTLVSKQQI
SGNLDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLQDNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTKEFQPVYQELKNLIPKSAVGTLS
SDSGNVINLIIDAYNSLSSEIILENSRLPEGVSISYISHCKNGVSQEGENGRKCSNIAIG
DQVTFEVAVTAKGCPSNGKSETLKIKPLGFTEEVEIVLNFICECECHKEGIPNSPNCSDG
NGTLECGACRCNEGRIGRVCECSKDEVRTEDLDANCRMDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCM
ASNKQICNGRGTCECGTCKCIDTKFQGQTCEICPTCPGVCTEHKDCVQCRAFGSGDKKDT
CEKECTNFDLKMVKKKEELPQPNDQPYINHCKERDANDCWFFFTYATRNDSTVVVHVAEE
LECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAGEN
PIYKSAVTTVVNPKYEDMDRRLTLHDYWLRS
NT seq 2436 nt   +upstreamnt  +downstreamnt
atggacgtgaggctgctcctgatttctgttcttctgggactcagcagggctcaactagat
ggtaacgaatgcaccaaagcctcggcccagtcctgtggagaatgcattcaggtcggagaa
aagtgtggctggtgtacagacgagaactttttgaagcaaggcgagcagaagtccacacgg
tgtgatgagattgaagctctgattaagaagggctgtaataagtccagtatagaaaatcct
cggggaaatgttaccgtcagcaagaaccaatctttaacagagcacacaaacagcactaag
gatggagcaaaactaaagccagaccagatcacccagattcaaccgcagaaactcacccta
gacctccgatcaggtgaagctcagaagttcgttctgacattcaggagggctgaggattat
cccatagatctctactacctgatggacctcagctactcaatgaaagatgatttagagaac
gtcaaaaacctgggaaccaaactgatgactgaaatgcaaaagatcacatctgacttcagg
atcggctttggctcctttgtggaaaaaactgtcatgccatacatcagcacaacgccagcc
aagctgctaaacccctgcacatcagaccagaactgcacaagcccgttcagctataaaaac
gtgctgagtttgacttccgatggatctcagtttaatacccttgtgagcaaacagcagatc
tcaggaaacctggactcaccagaaggagggttcgacgccatcatgcaagtggctgtctgt
gcgaaccaaattggctggaggaatgtgacccgtctgcttgtgttttccacggatgctgga
ttccactttgctggagacggaaaactgggcggcatcgtgcttcctaatgatgggaaatgc
catctacaggataacatgtacactatgagccattactatgactatccttcgatcgcacat
ctggttcagaaattaagcgaaaacaacattcagaccatttttgctgtaactaaagagttc
cagcctgtttaccaggagctgaaaaacctcattccaaagtcagctgtgggaacgctgtct
tccgactccggcaatgtgatcaatctcattattgatgcatataattctctgtcttctgag
atcattctggagaacagtaggctccccgaaggtgtgtccatttcctacatctcccactgc
aagaatggagtgagtcaagaaggagaaaatgggagaaagtgctccaacatcgccattggg
gatcaggtgacgtttgaggtagcggtcacggctaagggctgtccatctaatggcaaatca
gagactttaaagatcaagccgctgggtttcactgaggaggtggagatcgtcctcaacttc
atctgtgaatgtgagtgtcataaagaaggaatccctaacagtccaaactgtagcgacggc
aatggcactctggagtgtggagcatgcaggtgcaatgagggacgtattggcagggtttgt
gaatgtagtaaagatgaggtcagaacagaagatctggatgcaaactgccgcatggataac
ggcacggacatctgcagcaacaatggagactgcgtttgtggaacgtgcgagtgcaaaaaa
agagacaacccagaggagagatacagcggaaagttctgcgagtgcgacaacttcaactgt
gaccgctccaacaacaagctctgcggaggtcacggtcgttgtgaatgcaggaagtgtatc
tgtgacgctaactacacaggaagtgcttgcgactgctcattggacacctcaacctgtatg
gccagtaacaaacagatctgtaacggtcggggcacctgcgagtgcggcacgtgtaaatgt
atagacacaaagtttcagggtcaaacctgtgagatctgcccaacctgtcctggagtttgc
actgaacacaaggattgtgtccagtgccgagcatttggttctggtgataagaaagacaca
tgtgagaaagagtgtactaacttcgatcttaaaatggtgaagaagaaggaggaacttcct
cagcccaacgaccagccctacatcaatcactgcaaagagcgtgatgctaacgattgttgg
ttcttcttcacctacgctaccaggaatgacagcaccgttgtggtccatgtggcagaggag
cttgagtgtccctctggccctgacatcatccccattgtagctggtgtggtcgcaggaatc
gttctgattggtttagcacttctgctcatctggaagctgctcatgattattcatgaccgc
agagagttcgccaagttcgagaaagagaagatgaatgccaagtgggatgcgggtgagaac
cccatttacaagagtgctgtgacgacagtggtcaaccctaaatatgaggatatggataga
agactaacgctgcatgactattggctgcgcagctga

DBGET integrated database retrieval system