Carassius gibelio (silver crucian carp): 127951055
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Entry
127951055 CDS
T08819
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03271
Virion - Rotavirus
cgib04145
Phagosome
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04517
IgSF CAM signaling
cgib04518
Integrin signaling
cgib04530
Tight junction
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
cgib05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
127951055
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127951055
04514 Cell adhesion molecule (CAM) interaction
127951055
04517 IgSF CAM signaling
127951055
04518 Integrin signaling
127951055
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127951055
09144 Cellular community - eukaryotes
04510 Focal adhesion
127951055
04530 Tight junction
127951055
09142 Cell motility
04820 Cytoskeleton in muscle cells
127951055
04810 Regulation of actin cytoskeleton
127951055
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127951055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127951055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127951055
04515 Cell adhesion molecules [BR:
cgib04515
]
127951055
04090 CD molecules [BR:
cgib04090
]
127951055
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127951055
Exosome [BR:
cgib04147
]
Exosomal proteins
Proteins found in most exosomes
127951055
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin beta subunits
127951055
CD molecules [BR:
cgib04090
]
Proteins
127951055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
127951055
NCBI-ProteinID:
XP_052404631
LinkDB
All DBs
Position
B2:25614832..25667516
Genome browser
AA seq
811 aa
AA seq
DB search
MDVRLLLISVLLGLSRAQLDGNECTKASAQSCGECIQVGEKCGWCTDENFLKQGEQKSTR
CDEIEALIKKGCNKSSIENPRGNVTVSKNQSLTEHTNSTKDGAKLKPDQITQIQPQKLTL
DLRSGEAQKFVLTFRRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTKLMTEMQKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTSDGSQFNTLVSKQQI
SGNLDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLQDNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTKEFQPVYQELKNLIPKSAVGTLS
SDSGNVINLIIDAYNSLSSEIILENSRLPEGVSISYISHCKNGVSQEGENGRKCSNIAIG
DQVTFEVAVTAKGCPSNGKSETLKIKPLGFTEEVEIVLNFICECECHKEGIPNSPNCSDG
NGTLECGACRCNEGRIGRVCECSKDEVRTEDLDANCRMDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCM
ASNKQICNGRGTCECGTCKCIDTKFQGQTCEICPTCPGVCTEHKDCVQCRAFGSGDKKDT
CEKECTNFDLKMVKKKEELPQPNDQPYINHCKERDANDCWFFFTYATRNDSTVVVHVAEE
LECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAGEN
PIYKSAVTTVVNPKYEDMDRRLTLHDYWLRS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaggctgctcctgatttctgttcttctgggactcagcagggctcaactagat
ggtaacgaatgcaccaaagcctcggcccagtcctgtggagaatgcattcaggtcggagaa
aagtgtggctggtgtacagacgagaactttttgaagcaaggcgagcagaagtccacacgg
tgtgatgagattgaagctctgattaagaagggctgtaataagtccagtatagaaaatcct
cggggaaatgttaccgtcagcaagaaccaatctttaacagagcacacaaacagcactaag
gatggagcaaaactaaagccagaccagatcacccagattcaaccgcagaaactcacccta
gacctccgatcaggtgaagctcagaagttcgttctgacattcaggagggctgaggattat
cccatagatctctactacctgatggacctcagctactcaatgaaagatgatttagagaac
gtcaaaaacctgggaaccaaactgatgactgaaatgcaaaagatcacatctgacttcagg
atcggctttggctcctttgtggaaaaaactgtcatgccatacatcagcacaacgccagcc
aagctgctaaacccctgcacatcagaccagaactgcacaagcccgttcagctataaaaac
gtgctgagtttgacttccgatggatctcagtttaatacccttgtgagcaaacagcagatc
tcaggaaacctggactcaccagaaggagggttcgacgccatcatgcaagtggctgtctgt
gcgaaccaaattggctggaggaatgtgacccgtctgcttgtgttttccacggatgctgga
ttccactttgctggagacggaaaactgggcggcatcgtgcttcctaatgatgggaaatgc
catctacaggataacatgtacactatgagccattactatgactatccttcgatcgcacat
ctggttcagaaattaagcgaaaacaacattcagaccatttttgctgtaactaaagagttc
cagcctgtttaccaggagctgaaaaacctcattccaaagtcagctgtgggaacgctgtct
tccgactccggcaatgtgatcaatctcattattgatgcatataattctctgtcttctgag
atcattctggagaacagtaggctccccgaaggtgtgtccatttcctacatctcccactgc
aagaatggagtgagtcaagaaggagaaaatgggagaaagtgctccaacatcgccattggg
gatcaggtgacgtttgaggtagcggtcacggctaagggctgtccatctaatggcaaatca
gagactttaaagatcaagccgctgggtttcactgaggaggtggagatcgtcctcaacttc
atctgtgaatgtgagtgtcataaagaaggaatccctaacagtccaaactgtagcgacggc
aatggcactctggagtgtggagcatgcaggtgcaatgagggacgtattggcagggtttgt
gaatgtagtaaagatgaggtcagaacagaagatctggatgcaaactgccgcatggataac
ggcacggacatctgcagcaacaatggagactgcgtttgtggaacgtgcgagtgcaaaaaa
agagacaacccagaggagagatacagcggaaagttctgcgagtgcgacaacttcaactgt
gaccgctccaacaacaagctctgcggaggtcacggtcgttgtgaatgcaggaagtgtatc
tgtgacgctaactacacaggaagtgcttgcgactgctcattggacacctcaacctgtatg
gccagtaacaaacagatctgtaacggtcggggcacctgcgagtgcggcacgtgtaaatgt
atagacacaaagtttcagggtcaaacctgtgagatctgcccaacctgtcctggagtttgc
actgaacacaaggattgtgtccagtgccgagcatttggttctggtgataagaaagacaca
tgtgagaaagagtgtactaacttcgatcttaaaatggtgaagaagaaggaggaacttcct
cagcccaacgaccagccctacatcaatcactgcaaagagcgtgatgctaacgattgttgg
ttcttcttcacctacgctaccaggaatgacagcaccgttgtggtccatgtggcagaggag
cttgagtgtccctctggccctgacatcatccccattgtagctggtgtggtcgcaggaatc
gttctgattggtttagcacttctgctcatctggaagctgctcatgattattcatgaccgc
agagagttcgccaagttcgagaaagagaagatgaatgccaagtgggatgcgggtgagaac
cccatttacaagagtgctgtgacgacagtggtcaaccctaaatatgaggatatggataga
agactaacgctgcatgactattggctgcgcagctga
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integrated database retrieval system