KEGG   Carassius gibelio (silver crucian carp): 127951067
Entry
127951067         CDS       T08819                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127951067
  09122 Translation
   03013 Nucleocytoplasmic transport
    127951067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127951067
   03041 Spliceosome [BR:cgib03041]
    127951067
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     127951067
Spliceosome [BR:cgib03041]
 Complex C
  Other components
   EJC/TREX
    127951067
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127951067
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 127951067
NCBI-ProteinID: XP_052404660
LinkDB
Position
B2:3409503..3419565
AA seq 655 aa
MSPPTHFDFTEARDTFTAATKSAVDIRNCKPLTNAFSHLPGNETEKKATLDQALRGVLEE
QIVKQKVNVEDFLSLIYISIDGVTEGICSASTPFLLLGDVLDCLPLDQCDKIFSFVEENV
STWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGLIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEQDSTLGLQHTEVKEEGMEVEEGEMGDEDAPAPCSIPIDYNLYRKFWT
LQDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSFKLDDMQASKRKLEEMRTAAGDHVYFA
KFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQSLWIEDTTKL
VYQLLRETPPDGDKFASMVEHILNTEENWNSWKNEGCPSFVKERPAETKPIRPSRKRQAP
EDFLGKGPDRKILMGNDELTRLWNLNPDNMEACKSDSREFMPSLEDFFEEAIEQADPSNM
VEEEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLENMVIKLAKELPKDLPS
EEIKTGEEDDEENGDNLLKESNDSPSIQSKAVTNSQMDEIAAKLGSQWKMLADHLEMSEK
EIRVIESDSEDVELQAKMLLVAWQDREGPQATMESLVSALNAAGFSNITEGLSET
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgtctcctccgactcacttcgacttcactgaagccagagatacattcacggctgccact
aaaagtgctgtggatatcaggaactgtaaacccctgaccaatgctttcagccatctgccg
ggaaatgaaacggagaagaaagccactctcgatcaagccctgcgtggagttcttgaagag
cagattgtgaagcagaaagtgaacgttgaagatttcctttctctgatctacatcagtata
gacggtgtgactgaaggcatctgttctgccagcactccttttcttcttctgggagatgtt
ctcgactgccttcctctggaccagtgcgacaaaatcttctcctttgttgaagaaaatgtg
tctacatggaaatctaataccttttactccgctggaaaaaattacttgttgagaatgtgc
aacgacctgctcaggagactctccaagtctcagaatacagtgttttgtggactaatccag
ctgtttttagcacgtctcttccctttgtcagaaaaatcaggcctgaacttacagagtcag
ttcaaccttgataacatcaccgtgttcaacaaaaatgagcaggatagcacacttggactg
cagcacaccgaggttaaggaggaagggatggaggtggaggagggagagatgggcgatgaa
gatgcacctgctccctgctccattcctattgactacaacttgtacagaaaattctggacc
ctgcaggactatttcagaaaccctgtgcagtgctatgacaagttctcatggatgactttc
ctgaagtattcagatgagacactagctgtgttcaagagcttcaagctggatgacatgcaa
gcgtcgaagagaaagctggaggagatgaggactgctgctggagaccacgtctactttgcg
aagttcctcaccagtgagaagttgatggaccttcagttgagtgacagcaacttcagacga
cacattctgcttcagtatctcatcctcttccagtatctcaagggccaggtcaagttcaag
agttccagctgtgttttgaatgacgatcagtctttgtggattgaggacacaaccaaacta
gtctatcagttattgagagaaacccctccagatggtgacaagtttgcgtcgatggttgag
cacatcctgaacaccgaagaaaactggaactcttggaaaaatgaaggctgtccaagcttt
gtgaaagaaagaccagcagagaccaaacccatccgtcccagcagaaagagacaagcacca
gaggactttttggggaagggccctgatcgcaaaatcctcatgggaaatgatgaactcaca
aggctctggaatctaaaccctgacaatatggaggcctgcaagtcagatagcagggagttc
atgccatccctggaggacttttttgaggaagctattgaacaggcagatccatcaaacatg
gtggaggaagaatacaaagttgtgcgtaactcaaactacggctggcgagccttgcgattg
ctctccagaaggagtccgcacttcttccagcccaccaaccagcagttcaagagtctagca
gactatctggagaacatggtcatcaaactggccaaagagcttcctaaagaccttccttct
gaggagataaaaacgggcgaggaggatgatgaggagaatggagataacctgttaaaagag
agcaatgacagtcccagcattcagagcaaggccgtgaccaacagtcagatggacgagatc
gcagccaagcttgggtcgcagtggaagatgctggcagaccacctggagatgagcgagaag
gagatccgcgtgatcgagtctgacagcgaggatgttgaactacaggccaagatgctgctg
gtggcctggcaggaccgagaaggccctcaagctacgatggagagcctggtctcggctctg
aacgcggctgggttcagtaacatcacagaaggtctcagcgaaacgtaa

DBGET integrated database retrieval system