Carassius gibelio (silver crucian carp): 127951101
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Entry
127951101 CDS
T08819
Name
(RefSeq) polypyrimidine tract-binding protein 2b isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127951101
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127951101
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127951101
NCBI-ProteinID:
XP_052404716
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All DBs
Position
B2:13946076..13963128
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AA seq
537 aa
AA seq
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MDGIASDIAVGVKRSSDELLSGSLYNSPNSSVTANGSDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVTYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSAAGESVLTPAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPPVDPSVAATLSKDSTSLLGTPSG
MVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGPGGVLLVSNLNEEMVTPQS
LFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQT
VQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPENVTEEDLRLL
FSNSGGTVKAFKFFQDRKMALLQTSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagtgatattgcagttggtgtgaagagaagctcagatgaattgctg
tctggcagtctgtacaacagtccaaactcttcagtcactgctaatggtagtgacagtaag
aaactgagggtggaggacagcatggacagcccaccatccagagtcattcatatccggaaa
ctccccaatgaggtttccgagactgaggtcatcgccctgggtttgccatttggaaaggtc
actaatatcctgatgcttaaaggcaaaaatcaggcatttttggagctaggaacagaggaa
gcagctgttaccatggtgacgtactacacagctgttacacctcaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagagctcaagactgacagtgcactcaaccagcga
gctcaggccgtgctacaggcggtgtccgcagtccaggagggtggctcaccaagctcagca
gccggcgagagtgtgttaacgcctgcccctagcccagtactgcgaataatcatcgacaac
atgttctacccagtcaccctggacgtcctccaacagatcttctccaagtttgggaccgtc
atgaagataatcacatttaccaaaaataatcagttccaggctcttctgcagttcagtgac
ccagtaaatgcccagcaggccaaactgtccttggatggccagaacatatacaactcctgc
tgcactttgcgcatcgacttctccaagctggtcaacctgaatgtaaaatacaacaacgac
aaaagtcgggattacacccggcctgatctgccctcaggagatggtcagccgcccgtggac
ccgtctgtggcagccactctcagcaaagattccacctccctgctcggtactccctctgga
atggtaacttcctactctagtggtggagggtttccatcttctctaggtgccatcagtcct
ctgagtgcagcagcagcagcggcggcagcagcagggagggtggcgttgtctggacattct
ggacctggtggagtgctcctggtcagcaacctcaacgaagagatggttacgccccaaagt
ctgtttaccctcttcggtgtctacggtgacgtgcagcgcgtgaagatcctttacaataag
aaggacagtgctctaatacagatgtctgatggaaaccaagctcagttagccatgagccat
ctaaacgggcagaagatgtatggcaagatcattcgtgtgaccctctccaagcaccagaca
gtacagctgcccagggagggtttagatgatcagggcctgaccaaggacttcaccagttct
cctctgcatcgcttcaagaagcctgggtccaaaaacttccagaacatcttccccccttca
gctactctccatctttctaacatacctgagaatgtgacagaggaggatttacgactgctc
ttctcaaactccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatggct
ctgctgcagacgtccacggtggaggaggcgattcaggcactcattgacctccacaactac
gacatgggccgtggccaccgcctgagagtgtctttctcaaagtccaccatctga
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