Carassius gibelio (silver crucian carp): 127951152
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Entry
127951152 CDS
T08819
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127951152
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Major cadherins
127951152
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
Cadherin_CELSR2_9th
Stevor
RIFIN
7TM_GPCR_Srw
Spore_permease
Motif
Other DBs
NCBI-GeneID:
127951152
NCBI-ProteinID:
XP_052404788
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Position
B2:18127509..18174796
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AA seq
804 aa
AA seq
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MLMGNCLLLFLWCLLDKSFVSPLHSSSQSRMGKEQHRNMMAHRKHGMMGVHRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHSDLDKGDSMVKYTLSGEGVGSIFTIEPSTGDIHALRSLDR
EEKSYYTLRAQAVDVLTGRPLEPESEFIIKVQDINDNEPRFLEGPYSASVPEMSPVGTYV
TQITATDADDPTYGNSARIVYSILHGQPYFSVDPKTGIIRVALPNMDREVKEMYQVVIQA
KDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVPESSPVGSSVGRVKAHDLDSG
KNAEVEYSIVPGDGGSMFDIYSNKNTQEGTVILKKRLDYETRKAYTFKVEASNAALDQRF
LHLGPFKDTATVKVNVLDVEEPPVFSRMSYRMETYEDTPVGIIVGAITAEDLDVGNSPVR
YSVERRKDSENHFDIDPVEGTLSVSEALDRERNTEHNVTVVATKVNNPLLSSKVTVTIKV
LDVNEFPPELAFVYETFVCENAKVGQVIQIISATDRDMPAVEHRFYFKSPSQTRNRNFTI
RDYGNNTAGVVTRRGGFRRLEQSMYLVPVIVEDGGYPIRSSTGTVSVRVCTCDTDGSLLS
CNAEAVFFPMGLSTGALMAILLCVVILLVMVVLYMGLRKHKKKDTLMSSKEDIRDNVIHY
DDEGGGEEDTQAFDIGTLRNPKGIKETVQLQKIRSEDEPDRASACMPNEDSEDIRNYIHH
CLLENSAPPYDSLVTYAYEGEGSVAESLSSIESWVLEPREDCRNICDWGPRFKTLAGIFK
EHECQDTEKTENEVHAEALNDRMD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggggaactgtctgctgctgttcctctggtgcctcttagacaaaagcttcgtc
tctcccctccactcttcatcccagagcaggatggggaaggagcagcacagaaacatgatg
gcacataggaaacacggcatgatgggagttcacagagtcaagagaggatgggtgtggaac
cagttctttgttctggaggaatacatgggttctgatccacagtatgttggaaagcttcac
tctgacctggataagggagacagtatggtgaagtacacactctcaggtgaaggagttggc
tctattttcacgattgagccaagcactggagacatccatgccttaaggagcctggaccga
gaagagaagtcttattacacactgagagcgcaggctgtggacgtgctcacaggcagaccc
ctagagcccgagtctgagtttattatcaaagtccaggacatcaatgacaatgagccaagg
ttcctagagggcccatactcggctagcgtcccagagatgtcacccgtcggcacatatgtg
acgcaaataaccgccactgacgctgatgaccctacttatggaaacagcgcacggatcgtg
tacagcatccttcatggccagccctacttctctgttgaccccaagacagggatcataaga
gttgccttacccaacatggatagggaagttaaagaaatgtaccaggtggtcatacaggct
aaggatatgggtggccagctcggaggtttagctgggacaacgaccatcaatatcactctc
cgtgatgtcaacgacaacccaccacggttttctaaaagtatctttcacctgcgcgtccct
gaatcttcacctgtgggatcatcggtggggagggtcaaagctcatgatctggactctggg
aagaatgctgaagtggaatatagcattgttcctggtgacggaggatccatgtttgatatt
tacagcaataagaacactcaagagggaacagtcattctaaaaaagcgtcttgactatgag
accagaaaggcctacacctttaaagtagaagcttcaaacgcagctcttgatcaacgattc
ctacacttgggaccttttaaggacactgccacagtgaaagtgaatgttctggatgtggag
gaaccccctgtcttcagccggatgtcttacagaatggaaacatatgaagacacaccagtg
ggcatcatcgtcggagccatcacagctgaggacctagatgtaggcaacagtcctgttaga
tattctgttgagcggagaaaggactctgaaaaccactttgacattgaccctgttgaagga
actctgtctgtcagcgaagccctggacagagagagaaatacagaacacaacgtcactgtt
gtagcaacaaaagttaacaaccccctgctgtccagcaaagttactgtcacaatcaaagtg
ctggatgtcaatgaatttcctccagaacttgcctttgtgtatgagacatttgtttgtgaa
aatgcgaaagtaggacaggtgattcagatcatcagcgccacagacagggacatgcccgct
gtcgagcaccgattttacttcaaatccccttcacagaccaggaacagaaacttcacaatc
agggactatggaaacaacacagctggagtggtgaccagacgaggggggttccggagactg
gagcagagcatgtacctggtgccagtcattgtggaggacggcgggtatccgatccgaagc
agcacggggacggtgtcggtgcgggtgtgcacctgtgacacagacggttccctcctttcc
tgcaatgcggaagccgtcttctttcccatgggactcagcactggagcgctaatggccatt
ctgttgtgcgttgtcattctgctggtgatggtagtgctctatatgggcctcagaaaacac
aagaagaaggacactctgatgtcgtcgaaagaggacatccgggacaatgtgatccactat
gacgatgaagggggtggggaagaggacacccaggcctttgacataggtacgttacgcaat
cccaaaggcatcaaagagacggtgcagctgcaaaaaataagatcagaggatgagcccgat
cgggctagtgcatgcatgcccaatgaggacagcgaggacatccgaaactacatccatcac
tgtcttctggagaactcagcacctccgtatgactctctggtcacgtatgcatatgaggga
gagggatcggtggccgagtctctcagttccattgagtcctgggtgcttgaacccagggag
gattgcagaaatatctgtgactggggtcctcgcttcaaaacactggctgggatatttaaa
gagcatgagtgtcaggacacggaaaagacggaaaatgaagtacacgccgaggcactaaat
gacagaatggactga
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