Carassius gibelio (silver crucian carp): 127951231
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Entry
127951231 CDS
T08819
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127951231
04518 Integrin signaling
127951231
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127951231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127951231
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127951231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Interfer-bind
Fn3_VIN3
Fn3_Dep-1_2nd
SdrD_B
DUF7949
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
127951231
NCBI-ProteinID:
XP_052404997
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All DBs
Position
B2:complement(21515971..21541031)
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AA seq
1020 aa
AA seq
DB search
MIVRFNRLKRGLFLLGMLFMVSRLVLSEEVGPAEKEVTFSHVYRIDSGCKQGSQVAQLSQ
DQASEGPLVTVDGENDIVFKHNIRLKSAGCGCADSEDFKALLYRVNGLEEEVTYLKSQCA
QGCCKGGSGVDTSCSGHGTYQHDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIIVTDVSLLVEWESVRGAEYYILSYYPKGDEGAIKEVQ
VENTKNSYLIKGLRPGVTYIVQVYAVIRGINSEPDEIVATTEVFGIEGIKVVGQTEDSIQ
VDWKNPAIAVDFFKLTHASPDGQGGQENVAMSQEARTKHTIVGLNPGTEYQIGVQAIKGE
SEGKPSYATGVTDIDAPTNLATRDVTENSATVVWDGVRAEIDGYVLTYSSAEGTSREIKV
AADATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLVTREVTEDSALV
TWDKVQADIDGYMLSYSSVDGSGQEVRVGADSTSYRFTALKPGVLYTVYVWAIKGPRSSR
KSSTEAETDIDAPTNLLTREVTEDSALVTWNKVQADIDGYMLSYSSVDGSGQEVRVGADS
TSYRFTALKPGVLYTVYVWAVKGPRSSRKATTEAETEIDAPKNLKATDVQTQTSTITWKA
PQANIDGYILSYRAEDGSMQTVEKMLTAQENRFALSDLAMGKKYIVTLIAYRGTKKSRAV
ETSFSTVGLAYEFPMDCMQIMRNGKMESGVYTIYINGNRSRTMQVYCDMTTDGGGWIVFQ
RRSTGKLNFMRRWREYIKGFGELTDEFWLGLEKIHELTNTPTQYEVRFDLGLGSERKYAI
YDNFKLAPSKQKFKLTIGNYKGNAGDAMTYHQGGSFSTVDSDNDIALGNCALTHQGAWWY
KNCHLANLNGGFGDNRHSMGVNWEPWKGHLQSLDFAEIKIRPVGVAGRQKRSLKRRVAVY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagattcaaccggctgaagagaggcctcttccttctagggatgctcttcatg
gtatcccgtcttgtgctgtctgaggaggtgggtcctgcagagaaagaagtcacgtttagc
catgtctacaggattgactctggttgtaagcagggttctcaagtggctcagctttcccag
gaccaggcctcagaaggaccgttagtcacagtggatggagagaatgacattgtcttcaag
cacaacatacgtctgaagtcggctggttgtggatgtgcagattccgaggacttcaaagcc
ctgctgtaccgtgtaaatggcctggaggaggaagtcacatacttaaagagccaatgtgct
cagggctgctgcaaaggagggtcaggtgtggacactagctgcagtgggcatggcacttac
cagcatgactcttgcagttgtaagtgtaacccaggctgggagggtccagactgctccatc
tcatcctgccccgatgaatgcaacgataatggccggtgtgttgacggacgctgcgtctgc
tatgaaggctacactggccatgactgcagccaactcacgtgccccaacgactgcaaagac
aaaggccactgtgtggatggcaaatgcgtgtgctttagtggattctcaggagaagactgc
agtatcgccacctgtccgaacgactgcataggaaacggacgctgtgtggatggacagtgc
atctgcgatgagggattctttggaatcgactgctccatggttctaggaccgaaaggcctc
cgtctgatcatagtcacagatgtgtctctgctggtggagtgggagtctgtgagaggagcc
gagtactacatcctgtcctactatccgaagggagacgagggagccattaaagaggtccag
gtggaaaacaccaaaaactcctacctgatcaaaggcctcagacccggagtcacatacata
gtgcaggtgtacgctgtcatcaggggcattaacagtgaaccggatgagattgtggctacg
actgaggtttttggtattgaaggaatcaaggtggtgggccagacagaggactctatccag
gtggactggaagaaccctgcgattgccgtggacttcttcaaactgacccatgccagccct
gatggtcagggaggacaggagaatgtagcaatgagccaagaggccagaaccaaacacacc
attgtaggcctcaacccaggaacagaatatcagataggcgtgcaagcaatcaaaggtgaa
agcgaaggcaagccatcctatgccacaggggtcacagacattgatgccccaaccaatctg
gcaaccagggatgtgacggagaactctgcaacggtggtgtgggatggtgtccgtgctgag
attgatggctacgtgctgacttacagctctgcagagggcaccagccgagaaattaaagtg
gctgcggatgctacttcttaccaactgacctctctgaaaccaggagtcctgtacacagtt
ttcctctgggcctacaagggctctcgttccagtaggaagagcatgaccgaagccgagacg
gatatagacgctcctactaacctcgtgaccagggaggtgacagaggactcggcgttggtg
acgtgggacaaggtgcaggctgacattgatggctatatgctgagctacagctctgtagat
ggctccggtcaggaggttcgagtaggagctgacagcacctcctacaggttcactgctctg
aagcctggagttctctacacagtctatgtgtgggccatcaagggccctcgttctagcaga
aagagctcaacagaagcagaaacagatatagatgctcctactaacctcttaacccgagag
gtgacagaggactcggcgttggtgacgtggaacaaggtgcaggctgacattgatggctat
atgctgagctacagctctgtagatggctccggtcaggaggttcgagtaggagctgacagc
acctcctacaggttcacagctctgaagcctggagttctctacacagtctacgtctgggct
gtgaaaggccctcgctcaagcagaaaagccacaactgaggctgaaacagagatcgatgcg
ccaaagaatctcaaagccactgatgttcagactcaaacctccaccataacctggaaagct
cctcaggctaatattgatggctacatcttgtcctacagggctgaggatggcagcatgcag
actgtggaaaaaatgttgactgcgcaggagaatagatttgctctttctgaccttgcaatg
gggaaaaagtacattgtcacccttattgcctacaggggcacgaagaagagtagggcagtg
gagacaagctttagtacagtgggcctggcctatgagtttccaatggactgcatgcagatt
atgaggaatggaaagatggagagtggcgtctacacaatttacatcaacggcaaccgtagc
agaaccatgcaggtgtattgtgacatgacaactgatggcggcggctggattgtgttccag
agacgaagcaccggcaaattaaatttcatgaggcgctggagagagtatattaaaggcttt
ggagaactgacagatgaattttggctcggcttggagaagatccatgagctgactaatact
cctacacaatatgaagtgcgtttcgatctgggcttgggttcagagcggaaatatgccatc
tatgataatttcaaattagcaccttccaaacagaagtttaaactcaccattggcaactac
aaaggaaatgctggtgatgccatgacctaccaccagggagggtctttctccacggtggat
tcagacaatgacattgcacttggtaactgtgccctgactcaccaaggggcctggtggtac
aagaactgccacctggccaatctgaacggtggatttggggacaacagacacagtatggga
gtcaactgggagccatggaaggggcaccttcagtctctcgactttgcagaaattaagatc
cggccagtgggagtagcgggcagacagaagaggtcactgaaaaggagagtagctgtgtat
taa
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