Carassius gibelio (silver crucian carp): 127951329
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Entry
127951329 CDS
T08819
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127951329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127951329
03012 Translation factors [BR:
cgib03012
]
127951329
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127951329
Translation factors [BR:
cgib03012
]
Eukaryotic type
Release factors
127951329
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
127951329
NCBI-ProteinID:
XP_052405135
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Position
A3:19831877..19840834
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AA seq
580 aa
AA seq
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MEAIDTAPDSWDQEDDGEAQVDEQLSNAFTTSLNVEAKPFVPNVHAAEFVPTFRQKDSDE
TVESAGPDTDANVEVSEPEAPPMENGDVEMGADDTWEQKGGEPSKAEAEPGGSPGGDGGQ
AEEDSPQEEGMEEEEEVVPTPKVIPTQPNAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLEKYEKEAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDA
PGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLV
NKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPRKDVHFMPCSGLTGANLKEPAEYCPWY
TGLPFIPHLDSLPNFNRSNDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRH
TVEVLSLLSDDVETDDAAPGENLKLRLKGIEEEEILPGFILCNAENLCHTGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAEKD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatagacactgcccctgattcctgggatcaggaggacgatggcgaggcccag
gtcgacgagcaactttccaatgcttttactaccagtctaaacgtggaggccaagccgttt
gtccccaacgtgcacgccgcagaattcgtcccgaccttccgacagaaggactccgatgaa
acggtggagtcagcgggtcctgatacagatgccaatgtggaagtatcagagcctgaggct
ccgcccatggagaacggtgatgtggagatgggagcagatgacacctgggagcagaaaggg
ggtgagcccagcaaggctgaggcagagccaggaggcagccctggaggagacgggggtcag
gcggaagaagactcccctcaagaggaaggaatggaggaggaggaagaagtagtgccaaca
cctaaagtaatccccacacagccaaatgcccccaagaaggaacatgttaacgtggtcttc
attggccatgtcgatgctggcaagtcaactattggaggacaaatcatgtatttaacagga
atggtggataaacgaactctggagaagtatgagaaagaagccaaggagaagaaccgggaa
acttggtacctttcttgggcccttgacacaaaccaggaggaaagagacaaaggaaaaact
gtggaagtcggacgtgcgtactttgagacagagaaaaagcactttaccattctggatgca
ccaggccacaaaagctttgtgcccaacatgattggtggagcttcacaagctgacttggca
gtgctggtaatctctgcaaggaaaggagaatttgagacgggcttcgagaaaggaggccag
acacgggaacatgccatgttggccaaaactgctggagtcaagcatttgattgtacttgta
aacaaaatggatgatccaacagtgaactggagtttggagaggtacgaagaatgtaaggag
aaacttgttccatttttgaagaaagttgggttcaaccccaggaaagatgttcatttcatg
ccgtgttcgggacttactggggccaatctgaaggagccagcagagtactgcccttggtat
acagggttaccattcattccacatctggatagtttgccaaatttcaacagatcaaatgat
ggaccagtcaggttacccatagtagacaagtataaggacatgggcactgtggtattgggg
aaattggagtcgggatcaatcagcaaagctcagcaacttgtgatgatgcccaacaggcac
actgtagaggtgctgagtttgctttctgacgatgttgaaaccgatgatgccgccccggga
gagaacttgaagttgcgactcaaaggcattgaagaagaggagatcttgccaggcttcatc
ctctgtaatgctgagaacctttgccacactgggcgcacctttgatgcccagatagtcatc
attgaacacaagtcaatcatctgcccaggttacaacgcagttcttcatatccacacctgc
attgaagaagtgcaaattacggccttaatctgtctggtagacaaaaagacgggggacaag
agcaaaacacgaccgcgcttcgtcaaacaagaccaggtgtgcattgctcgtctgagaaca
gctgggaccatctgccttgagaccttcaaagatttccctcaaatgggacgtttcacctta
cgagatgaagggaaaaccattgccattggaaaagtgttgaaacttgttgctgagaaggac
tga
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