Carassius gibelio (silver crucian carp): 127951330
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Entry
127951330 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04217
Necroptosis
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127951330
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127951330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127951330
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
127951330
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
127951330
Multi subunit type E3
LUBAC complex
127951330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
UBA_HYPK
UBA
Motif
Other DBs
NCBI-GeneID:
127951330
NCBI-ProteinID:
XP_052405132
LinkDB
All DBs
Position
B2:complement(17694748..17710654)
Genome browser
AA seq
1088 aa
AA seq
DB search
MQLVLPHSASMRLDVTYVSVSRMRVSKSAAPLSISSMASLSDQLEELRVNAEASLSTPGS
AQETRAQVAAMADIPLPPSSKYRYIAAESMLTENSSGHNMKETLSLLQKLSTALNILEKY
GSNLTNPNRPKYWRTVKYNNPVFRTTVDSIQGGRAVLNLYGYTNQQQDGLSFPDDVVQPD
VGNVASVTLEVMCLRMELDMLIKGTHPHPEFFERLIPSLTVQDEEICTDSAPFSPSERPW
EKQSLSPASTPSQPKSPFSPALSLSSLVPSKHTENCTICGIFAVSAHCPTCTQRLCTECD
QLYHSHSGRSTHIRIPVTSSKATKRLSSSLSTWQCSYCTTVNTMQQVLCETCERPRLSSA
APSLQEEQSQPSTISEWQCKSCTVVNAGSSILCEVCERPRLATRPPVAPSRPTPTAAGLM
DSQWVCQVCTYVNKTPSPACEMCFSRSEPAQSPSKPLSPVKDITPLPAPPKVIPTEDPDL
KRQRLMREEGLKLIQLIREGEKKGVSPEEVYTSMCVSGNSNVMPYDWLKAELPHVLDEIC
VMAASCQQEPNAQSNCSGGNNGQDGQKSNAVPLSRAEAKRAWLAAGGDNEKAVRQALRHR
RVKVKELGSLGFNDVTRCEEALRQSGGDVRGALVQLQRPLLEPFHQRMWSDEPEPPIDIN
HPDKQHVCRRLLAVFDLPSWGRCELVLSLLQDPTATYTLEDVVQAVRESPDRDFIRRVLN
KDCPICLSVFPHSKMRSLTSCQCSVCCGCFKQHFTIAVRDKHIRDMVCPVCTEPDINDPE
HLNSYFSTLDIQLRDCLEPDVYDLFHKKLTEQALIKDPKFLWCSHCSYGFIYDGDQLKVT
CMQCRKSFCAQCKKTWEAQHLGLSCEQFQQWKRENDPEYQKQGLAGYLRDNGITCPNCRF
QYALAKGGCMHFSCSQCRYQFCSGCNNPFHTTCAVNQCTVTGLHAHHPRDCLFYLRDWEP
ARLQALLQKKGVNYNTDTAPGAQTGVCGVSEQKDEGTRQTDSPCGAQTQPGQAGLCEKHY
REYLVSLINGHSIDPAPLYDLDELTVACRRYHVDVRQGDGEDERAYFARLLKKLMDDVPL
GDKVPRKK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcagttggtgcttcctcacagcgcctctatgcggctagatgtaacgtatgtttcagtt
tcgcgtatgagagtgagtaagagcgctgctcctctgtcaataagctctatggcctctctc
agtgatcagctggaggagctgagggtgaatgcggaagccagcttgtctaccccaggttct
gcccaggagaccagggcacaggtggcagccatggccgacatccccctcccgccctccagc
aaatatcgctacattgctgctgaaagcatgctgacggagaacagtagtgggcataacatg
aaggagacccttagcctgctgcagaaactttccactgctcttaacatcttggagaagtat
ggctcaaatcttaccaatcccaacaggccgaagtactggcgtacagtaaagtacaacaac
ccagtcttcaggaccactgtagactcaattcagggtggcagagcagtactcaacctgtac
ggctacaccaatcagcagcaagatggcttgagctttcctgatgatgttgtccagccggat
gttggcaatgtggcgtctgtgactcttgaggtcatgtgcctccgaatggagctggacatg
ctaatcaagggtacccatcctcatccagagttttttgaaagacttattccctccctcact
gtgcaggatgaggaaatctgcacagattcagctcccttctctcctagtgaaagaccatgg
gaaaaacaatctctctcacctgcatcgactccttctcagcctaaatctcctttcagtcca
gcgctctctctttcttctctagtgccctctaaacacacagagaactgcaccatatgtggt
atctttgcggtgtctgctcactgtcccacctgtactcagcggctgtgcacagaatgtgac
cagctgtatcactcccattcaggacgttccacacacattaggattcctgtgacttcctca
aaagccacgaaacggctcagctcctcattgtcaacatggcagtgttcgtactgcactaca
gtaaatacaatgcagcaggttttgtgtgaaacctgtgaacgaccccggttgtcatctgct
gctccgtctctacaggaagagcaatcacagccctctacaatatctgagtggcaatgtaaa
agctgcactgtggtgaatgcaggcagcagcattctgtgcgaggtgtgtgagcgccctcgt
ctggccaccagaccccctgtcgcaccctcacgcccgacccccactgctgcaggactaatg
gacagccagtgggtttgccaggtttgtacgtacgtcaacaaaacaccatcacctgcatgc
gaaatgtgtttttcgagatcagagcctgctcaatcaccctctaagcccctctcaccagtc
aaggacatcacaccgcttccagccccacctaaagtcattcctactgaggaccctgatttg
aaaaggcaaagattgatgagggaagaagggcttaaactcatccagctcattcgtgaggga
gagaagaaaggagtgagcccggaggaggtttacaccagcatgtgtgtgtcgggaaacagt
aatgtaatgccgtatgactggctgaaagcagagctacctcatgtgcttgatgagatctgt
gtgatggctgcatcctgtcagcaagaacccaacgcacaatcgaactgttcaggggggaac
aatggccaggatggacaaaagagcaatgctgtgcccctgtccagagcagaagccaaacgg
gcctggctggcagcagggggagataatgagaaggctgtcaggcaggctctcagacaccgt
agagttaaagtaaaagagcttggctctctgggatttaatgatgtgacccgctgtgaagaa
gccctgcggcagagtggaggggatgtgaggggggctcttgttcagctgcagcgcccttta
ctggagccattccatcagcgcatgtggagcgatgaaccagagccccctatcgacatcaac
catccagataaacagcatgtttgccgtaggctgctggcagtgtttgatctgcccagctgg
gggcgctgtgagctggttctgtcattgctgcaggaccctacagccacatacacactggag
gatgtggttcaggccgtgcgtgaatcacctgaccgggacttcattcgccgtgtgctgaat
aaggattgccccatctgcctgtcagtttttccccacagcaagatgcggtctttgacatca
tgccagtgctccgtgtgctgtggatgtttcaagcagcatttcaccatagcggtgagggac
aagcacatcagagacatggtgtgtcctgtctgcacagagcctgacatcaatgaccctgag
cacctgaacagctacttttccactctggacatacagttaagggattgtcttgaaccggat
gtgtacgatcttttccacaagaagctgactgagcaggctctaatcaaggacccaaagttc
ctctggtgcagccattgctcctatggcttcatctatgatggcgatcaactcaaggtcacc
tgtatgcagtgcaggaaaagcttctgtgctcaatgcaaaaaaacgtgggaagcgcagcat
ttggggctctcgtgtgagcagttccagcagtggaagcgagagaatgaccccgagtaccaa
aagcagggtttggccgggtatcttcgtgacaatgggatcacttgccctaactgcaggttc
cagtatgctctggccaagggcggctgtatgcacttcagttgttctcagtgcaggtatcag
ttctgcagtggatgtaacaaccccttccacacaacgtgtgcagtgaaccagtgtactgtg
acaggtctgcatgcccatcaccccagagactgcctcttctacctccgagactgggagcct
gccaggcttcaggccttactgcagaaaaagggggtgaactacaatactgacaccgcacca
ggagcacagactggtgtgtgcggagtgagcgagcagaaagacgaagggactcgtcaaacc
gattcgccatgtggggctcagactcagccgggccaggcgggactctgcgagaagcattat
cgagagtacctggtcagcctcattaatgggcattctattgaccccgcacccctttacgat
ctcgatgagctgactgtggcctgcaggagataccatgttgatgtcagacagggggatgga
gaagacgagagagcatactttgccagactgcttaagaaactcatggatgacgtgcctctg
ggtgacaaggtccctcgcaagaagtga
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