Carassius gibelio (silver crucian carp): 127951551
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Entry
127951551 CDS
T08819
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127951551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127951551
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127951551
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
127951551
NCBI-ProteinID:
XP_052405459
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Position
B2:complement(17064635..17074657)
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AA seq
673 aa
AA seq
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MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPVTTAVFVLLSRFSLFHPIQWISDCTSLLT
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGTPCRQSESGEVATCLNEYHLFLLLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLLMVVKCSVIQALYSARNFAALYFFFGYIPKTWISSTLNLQ
IDSSLQSLDSLTGLLDFSLLYHLSISGTFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQCLPKVLTEKTTLVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHPHNWNAISGECL
SLLSELTQRLVAHQDAVASNGRVKSPSASSDTRSASSSSSVVSGTEGIAETPRPSVPLRT
PGSVFKSSVGGANSALTAPFTPDVNSPFSSPALRRLVGQQDPQSPWSGAVQSPHIMRRGP
KLWSASTESQSNGSPLASPAPASVPSPPAANQKPSFLAQWLQNRREQVKSFLAKRVLIVY
LFNKLPEASSQALFADSQAHIWALQGLSHLVAASFSEDQFGVVQTTLPNILSSLVVLLEA
VDRHFKLPHASSKPVRTICSMGDSTYKTLRFALRAALKTAIYKITTTFGEHLNAVNISTE
HRKRLQQFLEFKE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgctgaaacagaactcttggtttataagaaaggttgtgatctggagggctgtg
gcgagtattgcatggtctgtgcttctcctgccagtgacaactgcagtctttgttctcttg
agtagattcagcctgtttcaccccatccaatggatatcagattgcacaagtcttcttacg
gcttcaagcaccatcttttcccttgtggtgctgtgtggggtggttctgatcactggcttt
tttaacttggagttctacactttggttccctctattccatgttcacgcatggctctcctg
gggacggtgctccaccctcgacagtgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgcgcttctgttaccatcggtggacgttacagcactctaggaactccc
tgcaggcaaagcgagagtggtgaagtagcgacctgtctgaatgagtatcatctttttctt
ctcttggctggggccttcatgggatacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccacggttcaagggctgtctg
ctgatggtggtgaagtgcagtgttattcaggccttatattcagccagaaattttgctgct
ctctatttcttttttgggtatattcctaagacctggatctccagcacacttaatctacag
atagacagttctcttcagtcgctggattcattgactggactactagacttctccctcctt
taccacctgtcaatcagtggcacttttctgtacctaacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacatttactgaggat
gcggagcagtgtcttcccaaagttttgactgagaagaccactttagtcatgaagtttttg
gctctacaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agtctgagtcagccaggtggtcaccctcataactggaacgccatcagtggggaatgtctg
tctttgctgagtgagctgacacagagactggtggctcatcaggatgcggtcgcctccaac
ggccgagtcaagtctccgtctgccagcagtgacaccagatcagcctcttcaagcagctca
gtggtgtcaggaacagagggcattgctgagacccctcgacccagtgtcccgctaaggacc
cctggttcggtcttcaagtcatcagtggggggagcaaacagcgctttgacggctcctttc
accccagatgtgaacagccctttctcttcccctgctcttcgacgtctggttggccaacag
gatccccagtctccctggtctggtgcagtacaaagcccccatatcatgaggagagggccc
aaactgtggagtgcctccacagagtcacaatccaatggcagtcctcttgcctcccctgcc
cctgcctctgttcctagtcctcctgcagccaatcagaaacccagcttcctggcccagtgg
ctacagaacaggagagagcaggttaaaagctttttggcaaagcgggtgctgatagtgtat
ttatttaacaagcttccagaagcctctagccaagctctgtttgctgacagccaggctcat
atctgggctctccaaggactgtctcatctggtggcagcctctttctctgaagatcagttt
ggagttgtgcagaccacattgcccaatattcttagcagcttggtagtcttgctagaggct
gttgacagacacttcaaactgccacatgcctccagcaaacctgtgaggaccatctgcagt
atgggagactccacttacaagactctaaggtttgctctgagggctgcgctgaagaccgcc
atctacaagataactaccacttttggagagcacttgaatgcggtgaatatttcaacagaa
cataggaaaaggcttcagcagttcttggaattcaaggaatag
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