KEGG   Carassius gibelio (silver crucian carp): 127951551
Entry
127951551         CDS       T08819                                 
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127951551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127951551
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127951551
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 127951551
NCBI-ProteinID: XP_052405459
LinkDB
Position
B2:complement(17064635..17074657)
AA seq 673 aa
MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPVTTAVFVLLSRFSLFHPIQWISDCTSLLT
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGTPCRQSESGEVATCLNEYHLFLLLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLLMVVKCSVIQALYSARNFAALYFFFGYIPKTWISSTLNLQ
IDSSLQSLDSLTGLLDFSLLYHLSISGTFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQCLPKVLTEKTTLVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHPHNWNAISGECL
SLLSELTQRLVAHQDAVASNGRVKSPSASSDTRSASSSSSVVSGTEGIAETPRPSVPLRT
PGSVFKSSVGGANSALTAPFTPDVNSPFSSPALRRLVGQQDPQSPWSGAVQSPHIMRRGP
KLWSASTESQSNGSPLASPAPASVPSPPAANQKPSFLAQWLQNRREQVKSFLAKRVLIVY
LFNKLPEASSQALFADSQAHIWALQGLSHLVAASFSEDQFGVVQTTLPNILSSLVVLLEA
VDRHFKLPHASSKPVRTICSMGDSTYKTLRFALRAALKTAIYKITTTFGEHLNAVNISTE
HRKRLQQFLEFKE
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgttttcgctgaaacagaactcttggtttataagaaaggttgtgatctggagggctgtg
gcgagtattgcatggtctgtgcttctcctgccagtgacaactgcagtctttgttctcttg
agtagattcagcctgtttcaccccatccaatggatatcagattgcacaagtcttcttacg
gcttcaagcaccatcttttcccttgtggtgctgtgtggggtggttctgatcactggcttt
tttaacttggagttctacactttggttccctctattccatgttcacgcatggctctcctg
gggacggtgctccaccctcgacagtgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgcgcttctgttaccatcggtggacgttacagcactctaggaactccc
tgcaggcaaagcgagagtggtgaagtagcgacctgtctgaatgagtatcatctttttctt
ctcttggctggggccttcatgggatacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccacggttcaagggctgtctg
ctgatggtggtgaagtgcagtgttattcaggccttatattcagccagaaattttgctgct
ctctatttcttttttgggtatattcctaagacctggatctccagcacacttaatctacag
atagacagttctcttcagtcgctggattcattgactggactactagacttctccctcctt
taccacctgtcaatcagtggcacttttctgtacctaacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacatttactgaggat
gcggagcagtgtcttcccaaagttttgactgagaagaccactttagtcatgaagtttttg
gctctacaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agtctgagtcagccaggtggtcaccctcataactggaacgccatcagtggggaatgtctg
tctttgctgagtgagctgacacagagactggtggctcatcaggatgcggtcgcctccaac
ggccgagtcaagtctccgtctgccagcagtgacaccagatcagcctcttcaagcagctca
gtggtgtcaggaacagagggcattgctgagacccctcgacccagtgtcccgctaaggacc
cctggttcggtcttcaagtcatcagtggggggagcaaacagcgctttgacggctcctttc
accccagatgtgaacagccctttctcttcccctgctcttcgacgtctggttggccaacag
gatccccagtctccctggtctggtgcagtacaaagcccccatatcatgaggagagggccc
aaactgtggagtgcctccacagagtcacaatccaatggcagtcctcttgcctcccctgcc
cctgcctctgttcctagtcctcctgcagccaatcagaaacccagcttcctggcccagtgg
ctacagaacaggagagagcaggttaaaagctttttggcaaagcgggtgctgatagtgtat
ttatttaacaagcttccagaagcctctagccaagctctgtttgctgacagccaggctcat
atctgggctctccaaggactgtctcatctggtggcagcctctttctctgaagatcagttt
ggagttgtgcagaccacattgcccaatattcttagcagcttggtagtcttgctagaggct
gttgacagacacttcaaactgccacatgcctccagcaaacctgtgaggaccatctgcagt
atgggagactccacttacaagactctaaggtttgctctgagggctgcgctgaagaccgcc
atctacaagataactaccacttttggagagcacttgaatgcggtgaatatttcaacagaa
cataggaaaaggcttcagcagttcttggaattcaaggaatag

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