Carassius gibelio (silver crucian carp): 127951578
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Entry
127951578 CDS
T08819
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127951578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127951578
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127951578
Complex C
U4/U6.U5 tri-SnRNP related factors
127951578
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
127951578
NCBI-ProteinID:
XP_052405510
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All DBs
Position
B2:complement(26519411..26525616)
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AA seq
470 aa
AA seq
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MAVSQQQQQQQAVSKPAGGKHGNNLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHMEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRSLGFMYIRYTQPPSDLVDWYDEFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPAQKAIDQHMKSRPRKPPQKDEQDAEEAADSGRHGDRCR
SRTPRKSPSPRRSQNRSRSRSHHREKQSASFDHELERERDRQRKEREGKDRDRDRERDRD
RRRSRTPDRTRERRRSRSASREKRKEREAESERERSRRKDREHHKDRERSKDKRSKGEGE
ERRHKEDKEDRKHREEKRSKRSRSRSRDRKHKTERSSKKRSRSGSRSRQEAGEEKNRKRE
RSHSKERSHKRSRSKERSHRRESSNGREHVKQEHPSHEKGERTNSVQVSP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaaccggctggcgggaaa
cacgggaacaacttgccgttatggggcaacgaaaagactatgaacctcaaccccatgatc
ctgacaaacgtcctgtcgtcgccatacttcaaggtccagctgtacgagctcaagacgtac
cacgaggtggtggacgagatttacttcaaggtcaatcatatggagccatgggaaaaaggc
agcaggaagaccgcggggcagacaggaatgtgcggaggggttcgaggagtcggtacgggt
gggattgtgtccactgcattttgcttgctgtataagctatttacactgaaactgacccgt
aaacaagtgatgggtctcatcactcacacagattcgccctatatcaggtcactgggcttc
atgtacatcaggtatacccaacctccttctgacttggtggactggtatgatgagttcctt
gacgacgaggaggagttggatgtgaaggctggaggagggtgcgtaatgacgatcggagag
atgctccgctccttcctaaccaagctggaatggttctcaacgttgttcccacgaatacct
gttcctgcgcagaaagcaatcgaccaacacatgaagagccgaccacgtaaacccccgcaa
aaagatgagcaggatgcagaggaggcagccgattcgggaaggcatggtgataggtgccgt
tccaggacacctaggaaaagtcccagtcccaggagatcccaaaatcgttcacggagtcgc
agccatcacagagaaaaacaaagcgccagctttgaccatgaactggagcgagaacgagat
cggcagcgcaaagaacgggagggaaaggaccgggatagagacagggagagagaccgagat
agacgacgctccagaacaccagaccggaccagggaacgacgccggagtcgcagcgccagt
cgagagaagcggaaagaaagggaggcagagagtgagagggagcgtagtcgcaggaaagac
agagagcaccataaagatcgggagaggtccaaagacaagaggagtaaaggagagggggaa
gagaggaggcacaaggaagataaggaggatagaaaacacagggaagaaaagaggagtaaa
cggtcaaggagcagaagcagagacaggaaacacaaaaccgaacgatctagcaagaagcgc
tcccgctcgggcagcaggagcaggcaggaagcaggggaggagaagaaccggaaaagggaa
cgcagccatagtaaggaacgctcacacaaacgcagtcgcagcaaagagcgatcgcaccga
cgagaatcaagcaatggacgagaacatgtaaaacaagagcatcccagtcatgaaaaagga
gaaagaacaaacagtgttcaagtgtctccctga
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