Carassius gibelio (silver crucian carp): 127951957
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Entry
127951957 CDS
T08819
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127951957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127951957
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127951957
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127951957
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127951957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
PMBR
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
127951957
NCBI-ProteinID:
XP_052406083
LinkDB
All DBs
Position
A3:21188259..21191210
Genome browser
AA seq
268 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACIKGGMCPFRHI
SGEKSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LPQQAQSQQKQQNTQPTNRSSQSLIQLTNTYVNNNQRMPNSVGIVHSNNMGGTRGPRPLD
QVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatcgcgagtgtcgatcatatcaagtttgatctagaaattgctgtagaa
caacagttaggcgctcagccgctgccttttccaggaatggacaagtcgggcgcagctgtg
tgcgagttcttcatgagagctgcttgtattaaaggtggaatgtgtcctttcagacacatc
agtggagaaaagagtgtggtgtgcaagcactggctgaggggcttatgcaagaaaggagac
caatgtgaatttttacacgagtatgacatgacaaagatgcctgaatgttatttctactct
aaatttggggagtgcagtaataaagagtgtccatttttgcacattgacccagaatctaag
attaaagattgtccatggtacgacaggggcttttgcaagcacggtccggattgcaggcac
agacacacaagaagagtcatctgtgtaaattaccttgttggcttctgtccagagggcaag
tcatgcaaatttatgcacccaagatttgaactccctatgggtgcaactgaacagccaccc
ttaccacaacaggcacagtctcagcaaaagcagcaaaacacacagcccacaaacaggtca
tcacagtcactcatccagttaaccaacacatacgtcaacaacaaccagagaatgccaaat
tctgttgggattgtgcactctaacaacatgggtggaactcgtggccctcgtccacttgat
caagttacgtgttacaagtgcggtgagaagggccattatgcaaataaatgcacaaaagga
cacctggcgtttttgagtggacagtaa
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integrated database retrieval system
