Carassius gibelio (silver crucian carp): 127952009
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Entry
127952009 CDS
T08819
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127952009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127952009
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127952009
Complex B
127952009
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
127952009
NCBI-ProteinID:
XP_052406181
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All DBs
Position
B3:complement(20472031..20480317)
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AA seq
490 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA
ETREERMERKRREKMERRQVVVEGELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIYIVFNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDRPIGSDRDRDRERRDRSRE
RDRDRGERRRTRSRERRRRTRSRERERVLATPAEEAGGGSRRRERERDRGVSGDSREKSK
DRDRERDRKKRSRSRDRKRDRERGKGVDGGEEGMGGLGDGMMPEGGDRGMEDALGGEPGR
GEDGGPEGEERGRDREKDRERDRDRKRSHRDKDRDRDRERRRDRDRDREHKRDRGDRDRG
DRREDRHVSSSGDQEGLGNRGEEGEDQLPPQSEEGSQDGMRMMDQDSMQSGEGYASNENG
YKMEPQGDEY
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtttctccccccgaacctgctggcattgtttgccccgcgggacccgatcccg
ttcctgccccagctggagaaactgccccatgagaagcatcacaaccagccctactgcggg
atcgcacccttcatccggcattttgaggaccccagagatgctcctccacccacgagagca
gagacgcgggaggagaggatggagagaaagagaagggagaagatggaaaggaggcaagtt
gtggtggaaggagaactgaagctatgggacccacacaacgatcctaatgctcaaggagat
gcgtttaagaccttgtttgtggctcgagttaattatgacaccacagaatccaaactacgc
cgcgagtttgaagtttatggtcctatcaaacgaatctatattgtgttcaacaagaaaacg
ggaaaaccaagaggctatgcgttcattgaatacgaacacgagagagacatgcactctgcc
tataagcacgcagatggcaaaaagattgatggacgtagagtgcttgttgatgttgaaaga
ggacgaacagtcaagggatggcacccccggagacttggcggaggtcttggtggtacaagg
cgaggaggggcagatgtcaacataaaacactcaggcagagatgacacctcccgctatgat
gaccgaccgattggaagtgaccgcgatcgggatcgtgaacgcagggatcgtagtcgggaa
cgagaccgggaccgtggtgagcgccgtcgtactcgatccagagagagacggagacgtacc
agatctcgtgagcgcgaaagggtcctcgcgactccagcggaggaggcaggcggtggcagt
cgccgccgagaaagggaaagagacagaggtgtttccggagacagccgagagaagagtaaa
gaccgagacagagaaagagaccgcaagaagagaagcaggagcagggatagaaagagagac
cgtgagagagggaagggtgtggatggaggagaggaaggcatgggagggctaggtgatggc
atgatgcccgaaggaggagataggggtatggaggacgccttgggtggtgagccaggacga
ggggaggatggagggcctgaaggagaggagagaggacgggatcgagaaaaagacagggag
agagaccgtgacaggaaacgcagccacagagataaagatagagacagagatcgggaaaga
aggcgagacagggatagagatcgtgagcacaagcgggaccggggcgatcgggaccgtggg
gaccgtagggaagacagacacgtgtcgtcctcaggagatcaggagggtttgggtaacaga
ggtgaagagggtgaagatcagctgccgccacagtcagaagaaggttcacaggatgggatg
aggatgatggatcaggattccatgcagtcaggagagggctatgcctcaaatgagaatgga
tacaagatggagccccagggcgatgaatactaa
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