Carassius gibelio (silver crucian carp): 127952065
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Entry
127952065 CDS
T08819
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04136
Autophagy - other
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127952065
04136 Autophagy - other
127952065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127952065
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127952065
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
127952065
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127952065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
BCAS3_WD40
DUF7099
RMC1_N
ELYS-bb
Dimeth_Pyl
Motif
Other DBs
NCBI-GeneID:
127952065
NCBI-ProteinID:
XP_052406290
LinkDB
All DBs
Position
A3:complement(21434040..21442215)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCTLSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGLYLSASSNTETVHIFKLETQREKSVPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQ
GRAFATVRLPFSGHKNVCALAIIQKIPRLLVAASDGYLYLYNLDPQEGGECTLMKQHKLD
GSAEPANEILEQTAHDRPLVAQTYSAAVAKGYTEDQGAVGGAGVEDDMNTLQLDEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aatcaggataacacatccctagctgttggtaccaagtccggctacaagtttttctccttg
tcatcagtggacaaattggaacaaatatacgaatgtactgacacagaagatgtgtgcatc
gtggagagattgttctccagcagccttgtcgctattgtcagccttaaggcacccaggaag
ctgaaagtctgtcatttcaagaaagggactgagatatgcaactacagctactcaaacact
atactggctgtaaaactaaacagacagagactgatcgtgtgtttagaggagtcactctat
atccacaacattagggatatgaaagtactacataccattcgagagacccctccgaatcct
tccggactatgtaccctgtcaatcagtaatgacaactgttacttggcctatccgggaagt
gcaacaattggagaggtacaagtttttgacactgtcaatctgagggcagctaacatgata
cctgcccatgatagtccactagcagcactggcatttgatgcgagcggcaccaaattggcc
acggcatctgagaagggcactgtaatccgagtgttctccattccagagggccaaaagctc
tttgagttccggaggggagtaaagagatgtgtgagcatctgttccctcgccttcagtatg
gatggactctacctgtctgcttcaagcaacacagagacagttcatatttttaagctggag
acccagagagagaagtcagtgcctcaagaggagcccactacttggacgggatacttcggt
aaagtattgatggcctccacaacgtatctgccagcacatgtgacagagatgttcactcaa
ggaagggcattcgctacagtcagactgcccttttcaggtcacaagaacgtctgcgctctg
gccataatccagaagatcccacgtctgctggtggctgcatcagatggctatctttacctg
tacaatctggacccacaggaggggggagagtgcacactaatgaagcagcataagttagat
ggaagtgcagagccagcgaatgaaattcttgaacaaacagctcacgaccggccacttgtg
gcacagacctacagtgctgctgttgccaaaggttacactgaggatcagggggcggtgggg
ggtgctggggtggaggatgacatgaacaccctgcagctggacgaagagaacgagcagcct
ccgttaatcctggaaacagactga
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