KEGG   Carassius gibelio (silver crucian carp): 127952074
Entry
127952074         CDS       T08819                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04144  Endocytosis
cgib04517  IgSF CAM signaling
cgib04530  Tight junction
cgib04810  Regulation of actin cytoskeleton
cgib05100  Bacterial invasion of epithelial cells
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    127952074
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127952074
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127952074
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    127952074
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127952074
   05100 Bacterial invasion of epithelial cells
    127952074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127952074
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgib04812]
    127952074
Membrane trafficking [BR:cgib04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    127952074
Cytoskeleton proteins [BR:cgib04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     127952074
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_RIG_2nd WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_TEP1_2nd WD40_Gbeta RMC1_N EIF3I Rax2 Beta-prop_SPT8 Beta-prop_EML Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 127952074
NCBI-ProteinID: XP_052406312
LinkDB
Position
A3:21422922..21427613
AA seq 370 aa
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKSHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
APTPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSASGNKLAWVSHDSTVTVVDPTISSTPS
QLKTEYLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFISKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtcactccaccagtttttgttggaaccaatcacatgccatgcgtggaaccgggaccgg
actcaaattgctatcagtccaaataatcacgaggtccatatatacaagaaaagtgggaat
cagtgggtgaaatctcacgagttaaaagaacacaatgggcacatcacgggcattgattgg
gctcctaaaagtgatcgtattgtgacctgtggagctgaccgtaatgcttatgtatggagt
caaaaggacggcgtgtggaaacccacccttgttattctcaggatcaaccgcgctgccacg
tttgtgaaatggtctccgctagagaacaagtttgcagtggggagtggagcgcgactcata
tccgtttgctactttgagtctgaaaatgattggtgggttagtaaacacatcaagaagccc
atccgttcaactgtcctcagtttagactggcatccaaataatgtgcttctggcagctggg
tcatgtgacttcaaatgcagggtattctctgcgtacatcaaggaggtggatgagaaacca
gctccaaccccatgggggtccaagatgccctttgggcaggtgatggcagagtttggtggg
gcaggaagtggaggatgggttcacagcgtctgtttctcagccagtgggaacaaactggct
tgggtcagccatgacagcaccgtcactgtagtggaccccacaataagctcaacgccaagt
cagctgaagacagaataccttgcccttctgagtgtgacttttgtttctgaaaacaacatt
gtggcagcaggtcacgattgctgccctatgctgttcagttttgatgatggtggaaccttg
accttcatatccaagttggacattccaaagcagagcatccagcgcaacatttctgccatg
gagcgcttccgcaacatggacaagagggccaccactgaggaccgcaatagcaccctagaa
accctgcatcagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaattgacggagcaatgaccatatgggatttcaagacctta
gagtcttcaatccaaggcctgcggatcatgtaa

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