Carassius gibelio (silver crucian carp): 127952079
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Entry
127952079 CDS
T08819
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib00514
Other types of O-glycan biosynthesis
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127952079
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127952079
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgib01003
]
127952079
Enzymes [BR:
cgib01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
127952079
Glycosyltransferases [BR:
cgib01003
]
O-Glycan biosynthesis
O-linked Gal type
127952079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Mre11_C_bact
Motif
Other DBs
NCBI-GeneID:
127952079
NCBI-ProteinID:
XP_052406315
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Position
B3:10913927..10923287
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AA seq
606 aa
AA seq
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MLWFVSVLWFCLMNTRPARGYFHEERWSPESPILAPRVMLALICRNAQHSLPHFLGTIDR
LDYPKDRIALWVATDHNIDNTTYLLRDWLINVQKLYHYVEWRPKEEPSKYHDEEGPKDWT
NERYAYVMKLKQAALESAREMWADYLMMIDCDNLLINRDVLWKLIKENKTIVAPMLESRA
AYSNFWCGMTSQGYYKRTPAYIPMRKQVRRGCFAVPMVHSTFLVDLRKEASRLLAFHPPH
PEYSWAFDDIIVFAFSARMAEVQMFICNKETYGHLPVPLRAHSTMQDEADSFIHTLLEVN
VRNPPVEPSRYVPKPVKRPDKMDFDEVFMINLKRRADRRERMLRALREQEIDCKIIAAVD
GKAMNVSEIQAMGIHMLPGYSDPYHGRPLTRGELGCFLSHYNIWKEIVDRGLKTSLVLED
DLRFEIFFKRRLQNLMHEVESEGLDWDLIYIGRKRMQVDRPEKAVPNIRNLVEADYSYWT
LGYMMSLQGAKKLLKAEPLSKMLPVDEFLPVMFNKHPVSDYMDQFETRDLKAFSAEPLLV
FPTHYTGEPGYISDTETSTVWDNEKMRTDWDRKRSGKTQEQAEISTEAQNSDVLQSPLDR
TARDEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctctggttcgtgtcggtgctgtggttctgtctgatgaacactcgaccagctcgagga
tacttccacgaagagcgctggagcccggagtctcctatattagctccccgagtaatgctc
gcgctcatctgccgtaacgcacagcactcgctgccacatttcctcggtactatagatcgc
ctcgattaccctaaagaccggatcgcgctgtgggtggcgaccgaccacaatattgacaac
actacttacctactgcgagactggctcatcaatgtacagaaactctaccattatgtggag
tggaggccaaaggaggaaccaagcaaatatcatgatgaggaaggaccaaaggactggacg
aatgagcgctacgcctatgtcatgaaactgaagcaggcagcgcttgagtctgcacgagag
atgtgggcagactatctcatgatgattgattgtgacaatctcctgatcaaccgagacgtc
ttatggaaactgataaaggagaacaagacgattgtggcaccaatgctggagtctcgtgct
gcctactcaaacttctggtgtggaatgacatcccagggctactataaacgaacccctgcc
tacatccccatgcgcaagcaagtgcgcagaggttgctttgctgttcccatggtgcactcg
actttcctggttgacctgcggaaagaagcttccagactgcttgcttttcacccaccacac
ccagagtacagctgggcctttgacgacattatagtctttgctttttcagcccgcatggca
gaggtacagatgtttatttgtaacaaggagacttatgggcatctgccagtgcctcttcgt
gcccacagcaccatgcaggatgaagctgacagcttcattcatactttgctagaggtcaat
gtgcgaaatcctccagttgagccttccagatacgtgcccaaacctgtcaaaagacctgat
aaaatggactttgatgaggtgtttatgatcaacctgaagcggcgggccgaccgtcgtgag
cgcatgctgagggcgttgagagagcaggaaatcgactgcaagattatagcagccgttgat
ggcaaagctatgaacgtcagtgagatccaagctatgggaatccacatgcttcccggctac
agtgacccctaccacggcagacctctgacgagaggagagctgggctgcttcctgtcccac
tataacatctggaaagagattgtagacagaggcctgaagacctcgctggtgcttgaagat
gatctgcggtttgagattttcttcaagcgtcgcctacagaatctgatgcatgaggtggag
agtgagggactggattgggacctcatttatattgggaggaagaggatgcaagtggaccga
cctgagaaggcggtaccaaacattcgcaacctggtggaggcggactattcctattggacc
ttgggctacatgatgtcattacaaggggccaaaaagctcctcaaagcagaaccactcagt
aaaatgttgcctgtggacgagttccttcctgttatgtttaataagcatccagtatcggac
tacatggatcagtttgagacgagggacctgaaagcattttcagcggagcccttgcttgtg
tttcctacacactacacgggtgaacctgggtatatcagtgacacagaaacctccacagtg
tgggacaatgagaagatgcgcacagactgggacaggaagcgctcgggtaaaacccaggaa
caggctgagatcagcacagaggcccaaaactcagatgtgctccagtctcctctggacaga
acagctcgagacgaactatga
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