Carassius gibelio (silver crucian carp): 127952083
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Entry
127952083 CDS
T08819
Name
(RefSeq) LIM homeobox transcription factor 1-alpha isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127952083
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
127952083
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
CRF1
Motif
Other DBs
NCBI-GeneID:
127952083
NCBI-ProteinID:
XP_052406319
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Position
B3:10944831..10966441
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AA seq
407 aa
AA seq
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MLPTEISGGVCFITSQHSKEGRNGMKTEETQSCLQQAPSATPYAEHMGGGEVCAGCESPI
ADRFLLRVNELSWHETCVKCAVCRSALSGTCYSRDRLLYCKHDYEKLFVRKCSACLQAIS
RSELIMRVLGQVYHLSCFSCCECERRLQRGDEFVLKEGQLLCRGDYEKEREMLAAISPAP
TDSVKSEDEDGGGVSVGGKAGDDGKEHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVR
ETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQEQEQMGGTRRGPSRGGRQSND
DSEDGSSSHGLDGLLSYSSLPRQQLLALDPNIYGSEQFRHGLTPPQLGPEQMHSYDSETV
FHDLDSDGSLSHLGDCLLSTAEAGVLAGRIGNPIDRLYSMQNSYFTS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaacagaaatctcaggtggagtgtgttttatcacgagtcagcactccaaagaa
ggaaggaacggaatgaaaacagaagaaacccaatcatgtcttcagcaggccccctccgcc
acaccttacgcagagcacatgggaggaggtgaggtgtgtgcagggtgcgagtctcccatc
gcggaccgcttcctcctgcgtgtcaatgaactgtcctggcatgagacgtgtgtcaagtgt
gcagtgtgtcgcagcgcgctgagcgggacctgctactctcgcgaccgcttgctttactgc
aagcatgattacgagaagttgtttgtgcggaagtgcagtgcctgtctgcaggcgatcagc
cgctcggagctcatcatgcgtgtgctgggacaggtgtaccacctgagctgcttcagctgc
tgtgagtgtgaacgccggctgcagagaggtgatgagtttgtgctaaaggagggacagctg
ctctgccggggagactatgagaaggagagagagatgctggcagccatcagtccggcccct
accgattcagtgaagagcgaggatgaggatggtggtggtgtctctgtaggagggaaggct
ggggatgatgggaaggagcacaagagatccaagagaccacgaaccatcctgaccacacaa
cagcggcgcgccttcaaggcttccttcgaggtgtcttccaaaccctgccgaaaggtcaga
gaaactctggcagctgagactggactgacagtgagagtcgtgcaggtgtggttccaaaac
cagagagcaaagatgaagaagatcgctcgcagacaacagcagcagcagcagcagcaagaa
caggagcagatgggcgggaccaggaggggcccgagcagagggggccgccagagtaacgat
gacagcgaggatggctccagcagtcacggactggacgggctgctctcttattcctctctg
ccacgccaacaactgctggctttggatcccaacatatacggtagcgagcagtttcgacac
gggctcacgccgccgcagctaggccccgagcagatgcactcctacgactcggagacggtt
ttccatgacttggacagcgatggaagcctcagtcatctcggggactgtctcttgtctacc
gcagaggctggagttctggcaggacgcataggaaatcccattgatcgcctctactcaatg
caaaactcctactttacctcatga
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