KEGG   Carassius gibelio (silver crucian carp): 127952084
Entry
127952084         CDS       T08819                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04144  Endocytosis
cgib04517  IgSF CAM signaling
cgib04530  Tight junction
cgib04810  Regulation of actin cytoskeleton
cgib05100  Bacterial invasion of epithelial cells
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    127952084
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127952084
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127952084
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    127952084
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127952084
   05100 Bacterial invasion of epithelial cells
    127952084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127952084
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgib04812]
    127952084
Membrane trafficking [BR:cgib04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    127952084
Cytoskeleton proteins [BR:cgib04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     127952084
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WDR55 Beta-prop_WDR75_1st Beta-prop_HPS5 WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT122_1st eIF2A EIF3I PEP5_VPS11_N RMC1_N WDR90_beta-prop_4th Beta-prop_SPT8 Tricorn_2nd SH3_3
Other DBs
NCBI-GeneID: 127952084
NCBI-ProteinID: XP_052406325
LinkDB
Position
A3:21427961..21433901
AA seq 369 aa
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGNNWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
APTPWGSKMPFGEVMFESTGTAGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVCTSL
TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNKAALSFGGKLDIPKQSAQKGMSARE
RFQNLDKKATTDTKEAVLESVHKNSISQISILNGGKAQCAKFCTTGMDGGMTIWDVKTLE
SAMKDLKIV
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtcttatcacagctttcttcttgaacctatcagctgtcatgcctggaacaaggaccga
actcaaattgcactgtgtcctaataaccatgaagtccatatctacaagaaggacggaaac
aactggaacaaaatccatgtgctgaaggagcacaatggtcaagtaactggtattgactgg
gcccccgagagcaatcgcattgtgacatgcggcactgaccgtaatgcctatgtctggacc
ctaaaaggagatgtatggaaacccaccctggtcattctgaggatcaaccgtgctgcccgc
tgtgtgaaatggtctcctaaagaaaacaagtttgcagtgggcagtggctcacgtctgatc
tcagtctgctattttgagcaggataatgactggtgggtgtgcaaacacattaagaagccc
atccgctctaccatcctttgtttggactggcaccccaataacgttcttttagcagctgga
tcatgtgactttaaatgcaggatcttttctgcgtacataaaggaagtagaagagaagcct
gctccaactccatggggctctaaaatgccctttggagaggtcatgttcgaatctactgga
accgcaggttgggtgcacggtgtctgtttctcggacagtgggaatcgagtggcctgggcc
agccatgacagcactgtggcagtggctgagggaggaaagactgctgtctgcaccagtctg
acttcagaaaccttgcctcttctgtgtgtgactttcattactgagaacagcctagtggca
gctggccatgactgctaccctgtgttgttcgtctatgattcgaacaaagcagccttgtct
tttggaggaaaactcgacatacccaaacagagtgctcagaagggcatgtcagccagagaa
cgcttccagaacctggataagaaagccaccactgacaccaaagaagctgtcctggagtct
gtgcacaagaacagcatcagccaaatctcaattcttaatgggggaaaagcacagtgtgcc
aaattctgcaccactggtatggacggaggcatgactatttgggatgtaaagacccttgaa
tctgcaatgaaggacctcaagattgtctag

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